Parental gene:

Ppp3r1, ENSRNOG00000043210

Aliases:None
Description:Calcineurin subunit B type 1 [Source:UniProtKB/Swiss-Prot;Acc:P63100]
Organism:Rat (Rattus norvegicus)
Coordinates:14:100178533..100227295(-)


>ENSRNOG00000043210
ATGGAGCAAGGAACGGACTTGCAGTCACAGATTTTCTTCCCTACAGAAAAGAATTTTTGGAAAAAAGGCAAAGACCACTT
CAGGCAAAATAAGTACCCATTCTCGAGGGAACTTTATAACCTGATTTTTGCTGACAGAAAGGGAAATGAGGCGAGTTACC
CTTTGGAAATGTGCTCACACTTCGATGCTGATGAGATTAAAAGGCTAGGAAAGAGATTCAAGAAGCTTGACTTGGACAAC
TCTGGTTCTTTGAGCGTGGAGGAGTTCATGTCTCTGCCTGAGTTACAACAGAACCCTTTAGTACAGCGGGTCATAGATAT
ATTCGACACAGACGGGAATGGAGAAGTGGACTTCAAAGAATTCATTGAAGGAGTCTCTCAGTTCAGTGTCAAAGGCGATA
AGGAACAGAAGTTGAGGTTCGCTTTCCGTATCTACGACATGGATAAAGACGGCTATATTTCCAATGGAGAGCTCTTCCAG
GTGTTGAAGATGATGGTGGGCAACAACCTGAAAGATACGCAGTTACAGCAGATTGTAGACAAAACCATAATAAACGCAGA
TAAGGACGGGGACGGGAGAATATCCTTTGAGGAGTTCTGTGCTGTTGTAGGTGGCCTAGATATCCACAAAAAGATGGTGG
TGGATGTGTGA

Library Parental gene expression (RPM)
SRP017611_brain 548 .57 RPM
SRP017611_kidney 98 .11 RPM
SRP017611_liver 41 .08 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000010619 ortholog_many2many 1 retrogene
retro_btau_1660,
Choloepus hoffmanni ENSCHOG00000002893 possible_ortholog 1 retrogene
retro_chof_2602,
Callithrix jacchus ENSCJAG00000006498 ortholog_one2many 1 retrogene
retro_cjac_624,
Dipodomys ordii ENSDORG00000019760 ortholog_one2many 1 retrogene
retro_dord_404,
Equus caballus ENSECAG00000009627 possible_ortholog 1 retrogene
retro_ecab_651,
Felis catus ENSFCAG00000028482 ortholog_many2many 1 retrogene
retro_fcat_1639,
Homo sapiens ENSG00000221823 ortholog_many2many 1 retrogene
retro_hsap_3,
Loxodonta africana ENSLAFG00000022682 ortholog_many2many 1 retrogene
retro_lafr_1014,
Macaca mulatta ENSMMUG00000017460 ortholog_one2many 1 retrogene
retro_mmul_1141,
Mustela putorius furo ENSMPUG00000006250 ortholog_many2many 1 retrogene
retro_mputfur_537,
Nomascus leucogenys ENSNLEG00000026538 ortholog_many2many 1 retrogene
retro_nleu_1049,
Oryctolagus cuniculus ENSOCUG00000027562 possible_ortholog 1 retrogene
retro_ocun_272,
Otolemur garnettii ENSOGAG00000034876 ortholog_many2many 1 retrogene
retro_ogar_1011,
Pan troglodytes ENSPTRG00000041941 ortholog_many2many 1 retrogene
retro_ptro_2909,
Rattus norvegicus ENSRNOG00000004742 within_species_paralog 2 retrogenes
retro_rnor_2034, retro_rnor_2223,
Sus scrofa ENSSSCG00000022362 possible_ortholog 1 retrogene
retro_sscr_86,
Ictidomys tridecemlineatus ENSSTOG00000025985 ortholog_many2many 1 retrogene
retro_itri_1569,
Tarsius syrichta ENSTSYG00000019531 possible_ortholog 2 retrogenes
retro_tsyr_326, retro_tsyr_41,
Tursiops truncatus ENSTTRG00000021395 ortholog_many2many 1 retrogene
retro_ttru_382,
Vicugna pacos ENSVPAG00000015522 possible_ortholog 1 retrogene
retro_vpac_3,
Drosophila melanogaster FBgn0015614 ortholog_many2many 1 retrogene
retro_dmel_53,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1932 76.52 60.65
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Download FASTA sequences of all ENSRNOG00000043210 retrocopies