Parental gene:

ENSFCAG00000028482

Aliases:None
Description:None
Organism:Cat (Felis catus)
Coordinates:A3:87769663..87844603(-)


>ENSFCAG00000028482
ATGTGCTCACACTTTGATGCTGATGAAATTAAAAGGCTAGGAAAGAGATTTAAGAAGCTCGATTTGGACAATTCTGGTTC
TTTGAGTGTGGAAGAGTTCATGTCTCTGCCTGAGTTACAACAGAATCCTTTAGTACAGCGAGTAATAGATATATTTGACA
CAGATGGGAATGGAGAAGTAGACTTTAAAGAATTCATTGAGGGAGTCTCTCAGTTCAGTGTCAAAGGAGATAAGGAACAG
AAGTTGAGGTTTGCTTTCCGTATCTATGACATGGATAAAGATGGCTATATTTCCAACGGGGAACTCTTCCAGGTGCTGAA
GATGATGGTGGGGAACAATCTGAAAGATACACAGTTACAGCAAATTGTAGACAAAACCATAATAAATGCAGATAAGGATG
GAGATGGAAGAATATCCTTTGAAGAATTCTGTGCTGTTGTAGGTGGCCTAGATATCCACAAAAAGATGGTGGTAGATGTG
TGA

Library Parental gene expression (RPM)
SRP017611_brain 152 .19 RPM
SRP017611_kidney 13 .50 RPM
SRP017611_liver 11 .73 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000010619 ortholog_many2many 1 retrogene
retro_btau_1660,
Choloepus hoffmanni ENSCHOG00000002893 possible_ortholog 1 retrogene
retro_chof_2602,
Callithrix jacchus ENSCJAG00000006498 ortholog_one2many 1 retrogene
retro_cjac_624,
Dipodomys ordii ENSDORG00000019760 ortholog_one2many 1 retrogene
retro_dord_404,
Equus caballus ENSECAG00000009627 possible_ortholog 1 retrogene
retro_ecab_651,
Felis catus ENSFCAG00000006346 within_species_paralog 1 retrogene
retro_fcat_1964,
Homo sapiens ENSG00000221823 ortholog_many2many 1 retrogene
retro_hsap_3,
Loxodonta africana ENSLAFG00000022682 ortholog_many2many 1 retrogene
retro_lafr_1014,
Macaca mulatta ENSMMUG00000017460 ortholog_one2many 1 retrogene
retro_mmul_1141,
Mustela putorius furo ENSMPUG00000006250 ortholog_many2many 1 retrogene
retro_mputfur_537,
Nomascus leucogenys ENSNLEG00000026538 ortholog_many2many 1 retrogene
retro_nleu_1049,
Oryctolagus cuniculus ENSOCUG00000027562 possible_ortholog 1 retrogene
retro_ocun_272,
Otolemur garnettii ENSOGAG00000034876 ortholog_many2many 1 retrogene
retro_ogar_1011,
Pan troglodytes ENSPTRG00000041941 ortholog_many2many 1 retrogene
retro_ptro_2909,
Rattus norvegicus ENSRNOG00000043210 ortholog_many2many 1 retrogene
retro_rnor_1932,
Sus scrofa ENSSSCG00000022362 possible_ortholog 1 retrogene
retro_sscr_86,
Ictidomys tridecemlineatus ENSSTOG00000025985 ortholog_many2many 1 retrogene
retro_itri_1569,
Tarsius syrichta ENSTSYG00000019531 possible_ortholog 2 retrogenes
retro_tsyr_326, retro_tsyr_41,
Tursiops truncatus ENSTTRG00000021395 ortholog_many2many 1 retrogene
retro_ttru_382,
Vicugna pacos ENSVPAG00000015522 possible_ortholog 1 retrogene
retro_vpac_3,
Drosophila melanogaster FBgn0015614 ortholog_many2many 1 retrogene
retro_dmel_53,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1639 83.75 100.00
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Download FASTA sequences of all ENSFCAG00000028482 retrocopies