Parental gene:

ENSECAG00000009627

Aliases:None
Description:None
Organism:Horse (Equus caballus)
Coordinates:15:33994911..34023230(+)


>ENSECAG00000009627
ATGTGCTCACACTTTGATGCTGATGAAATTAAAAGGCTAGGAAAGAGGTTTAAGAAGCTTGATTTGGACAATTCTGGTTC
TTTGAGTGTGGAAGAATTCATGTCTCTGCCTGAGTTACAACAGAATCCTTTAGTACAACGAGTAATAGATATATTCGACA
CAGACGGGAATGGAGAAGTAGACTTTAAAGAATTCATTGAGGGGGTCTCTCAGTTCAGTGTCAAAGGAGATAAGGAACAG
AAGTTGAGGTTTGCTTTCCGTATCTATGACATGGATAAAGATGGCTATATTTCCAATGGGGAACTCTTCCAGGTGCTGAA
GATGATGGTGGGGAACAATCTGAAAGATACACAGTTACAGCAAATTGTAGACAAAACCATAATAAATGCAGATAAAGATG
GAGATGGAAGAATATCCTTTGAAGAATTCTGTGCTGTTGTAGGTGGCCTAGATATCCACAAAAAGATGGTGGTAGATGTG
TGA

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 35 .06 RPM
SRP021940_cerebellum 150 .08 RPM
SRP021940_embryo 24 .70 RPM
SRP021940_placental_villous 77 .41 RPM
SRP021940_synovial_membrane 27 .18 RPM
SRP021940_testis 24 .11 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000010619 possible_ortholog 1 retrogene
retro_btau_1660,
Choloepus hoffmanni ENSCHOG00000002893 possible_ortholog 1 retrogene
retro_chof_2602,
Callithrix jacchus ENSCJAG00000006498 possible_ortholog 1 retrogene
retro_cjac_624,
Dipodomys ordii ENSDORG00000019760 possible_ortholog 1 retrogene
retro_dord_404,
Equus caballus ENSECAG00000019751 within_species_paralog 1 retrogene
retro_ecab_1099,
Felis catus ENSFCAG00000028482 possible_ortholog 1 retrogene
retro_fcat_1639,
Homo sapiens ENSG00000221823 possible_ortholog 1 retrogene
retro_hsap_3,
Loxodonta africana ENSLAFG00000022682 possible_ortholog 1 retrogene
retro_lafr_1014,
Macaca mulatta ENSMMUG00000017460 possible_ortholog 1 retrogene
retro_mmul_1141,
Mustela putorius furo ENSMPUG00000006250 possible_ortholog 1 retrogene
retro_mputfur_537,
Nomascus leucogenys ENSNLEG00000026538 possible_ortholog 1 retrogene
retro_nleu_1049,
Oryctolagus cuniculus ENSOCUG00000027562 ortholog_many2many 1 retrogene
retro_ocun_272,
Otolemur garnettii ENSOGAG00000034876 possible_ortholog 1 retrogene
retro_ogar_1011,
Pan troglodytes ENSPTRG00000041941 possible_ortholog 1 retrogene
retro_ptro_2909,
Rattus norvegicus ENSRNOG00000043210 possible_ortholog 1 retrogene
retro_rnor_1932,
Sus scrofa ENSSSCG00000022362 ortholog_one2many 1 retrogene
retro_sscr_86,
Ictidomys tridecemlineatus ENSSTOG00000025985 possible_ortholog 1 retrogene
retro_itri_1569,
Tarsius syrichta ENSTSYG00000019531 possible_ortholog 2 retrogenes
retro_tsyr_326, retro_tsyr_41,
Tursiops truncatus ENSTTRG00000021395 possible_ortholog 1 retrogene
retro_ttru_382,
Vicugna pacos ENSVPAG00000015522 possible_ortholog 1 retrogene
retro_vpac_3,
Drosophila melanogaster FBgn0015614 ortholog_many2many 1 retrogene
retro_dmel_53,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_651 77.64 100.00
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Download FASTA sequences of all ENSECAG00000009627 retrocopies