Parental gene:

Stip1, ENSRNOG00000021164

Aliases:None
Description:Stress-induced-phosphoprotein 1 [Source:UniProtKB/Swiss-Prot;Acc:O35814]
Organism:Rat (Rattus norvegicus)
Coordinates:1:229264911..229291272(-)


>ENSRNOG00000021164
ATGGTTGAGCAGGTGAATGAGCTAAAGGAGAAGGGCAATAAGGCCCTGAGTGCTGGGAACATTGATGATGCCTTACAGTG
CTACTCTGAGGCAATTAAACTAGATCCTCAGAACCATGTGCTCTATAGCAATCGCTCTGCAGCCTATGCCAAGAAAGGAG
ACTACCAGAAGGCGTATGAGGACGGTTGCAAGACTGTTGACCTGAAGCCTGACTGGGGCAAGGGTTATTCAAGAAAAGCA
GCAGCCCTTGAGTTCCTAAACCGGTTTGAAGAAGCCAAACGAACCTATGAAGAAGGTTTAAAACATGAAGCCAATAATCT
ACAGCTTAAGGAAGGCTTGCAGAACATGGAGGCCAGGTTGGCAGAGAGGAAATTTATGAATCCTTTCAACTTGCCTAATC
TGTACCAGAAGTTAGAGAATGATCCCAGGACAAGGACACTGCTCAGTGACCCCACCTACAGGGAACTCATAGAGCAACTA
CAGAACAAGCCTTCAGACCTGGGCACGAAACTCCAAGATCCCCGGGTCATGACTACTCTCAGTGTCCTCCTTGGAGTTGA
TCTGGGCAGTATGGATGAAGAGGAAGAGGCAGCAACACCCCCACCTCCACCCCCTCCTAAAAAGGAGGCCAAGCCAGAAC
CAATGGAAGAAGATCTTCCAGAGAATAAGAAACAGGCTCTGAAAGAAAAGGAGCTGGGAAATGATGCCTACAAGAAGAAA
GATTTTGACAAGGCCCTGAAGCATTATGACAAGGCCAAGGAGCTGGACCCTACCAATATGACTTACATAACTAATCAAGC
AGCTGTGCACTTTGAGAAGGGCGACTACAACAAATGCCGGGAGCTCTGTGAGAAGGCCATTGAAGTAGGCAGAGAGAACC
GAGAGGACTACCGTCAGATCGCCAAAGCTTATGCTCGAATTGGCAATTCCTATTTCAAAGAAGAAAGGTACAAGGATGCT
ATCCATTTCTACAACAAGTCTCTGGCAGAGCACCGAACCCCAGATGTGCTCAAGAAGTGCCAGCAGGCAGAGAAAATTCT
GAAGGAACAAGAGCGACTGGCTTATATCAACCCTGATTTGGCTTTGGAGGAAAAGAATAAGGGCAATGAGTGCTTCCAGA
AAGGGGACTACCCCCAGGCCATGAAGCACTATACAGAAGCCATTAAAAGGAACCCAAGAGATGCCAAACTATACAGCAAC
CGAGCCGCCTGCTACACCAAGCTCCTGGAGTTTCAGCTGGCACTCAAGGACTGTGAAGAGTGCATCCAGCTAGAGCCAAC
CTTCATCAAGGGTTATACACGGAAAGCAGCTGCCCTGGAAGCCATGAAGGACTATACAAAAGCCATGGATGTGTACCAGA
AGGCATTAGACCTGGACTCCAGCTGTAAGGAAGCAGCAGATGGTTACCAACGCTGTATGATGGCACAGTACAACAGACAT
GATAGCCCTGAGGATGTGAAACGGCGGGCCATGGCTGACCCTGAGGTACAGCAGATAATGAGTGACCCAGCCATGAGGCT
CATCCTGGAGCAGATGCAAAAGGACCCCCAAGCTCTGAGCGAACACTTAAAGAATCCTGTAATAGCACAGAAGATCCAGA
AGCTGATGGATGTGGGTCTGATCGCAATTCGGTGA

Library Parental gene expression (RPM)
SRP017611_brain 126 .61 RPM
SRP017611_kidney 75 .64 RPM
SRP017611_liver 38 .93 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000015663 ortholog_one2many 2 retrogenes
retro_btau_836, retro_btau_913,
Canis familiaris ENSCAFG00000014672 ortholog_one2one 6 retrogenes
retro_cfam_1077, retro_cfam_1172, retro_cfam_1722, retro_cfam_1982, retro_cfam_474, retro_cfam_497,
Callithrix jacchus ENSCJAG00000018209 ortholog_one2one 2 retrogenes
retro_cjac_1043, retro_cjac_2222,
Cavia porcellus ENSCPOG00000002914 ortholog_one2one 1 retrogene
retro_cpor_1443,
Felis catus ENSFCAG00000005937 ortholog_one2one 1 retrogene
retro_fcat_1510,
Homo sapiens ENSG00000168439 ortholog_one2one 1 retrogene
retro_hsap_4867,
Gorilla gorilla ENSGGOG00000012132 ortholog_one2one 1 retrogene
retro_ggor_3040,
Microcebus murinus ENSMICG00000016933 ortholog_one2one 1 retrogene
retro_mmur_1045,
Macaca mulatta ENSMMUG00000012953 ortholog_one2one 1 retrogene
retro_mmul_2607,
Nomascus leucogenys ENSNLEG00000004777 ortholog_one2one 1 retrogene
retro_nleu_2000,
Pan troglodytes ENSPTRG00000003820 ortholog_one2one 1 retrogene
retro_ptro_3242,
Ictidomys tridecemlineatus ENSSTOG00000014262 ortholog_one2one 1 retrogene
retro_itri_1578,
Tursiops truncatus ENSTTRG00000010235 ortholog_one2one 1 retrogene
retro_ttru_1900,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_468 87.13 99.82
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_rnor_2862 76.19 53.49
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSRNOG00000021164 retrocopies