Parental gene:

Sepw1, ENSRNOG00000013548

Aliases:None
Description:selenoprotein W [Source:RefSeq peptide;Acc:NP_037159]
Organism:Rat (Rattus norvegicus)
Coordinates:1:78801627..78804176(-)


>ENSRNOG00000013548
ATGCGACGTGCAGCAATGGCGCTAGCCGTTCGAGTCGTGTATTGTGGTGGTCGAGGCTATAAGCCCAAGTATCTCCAGCT
CAAGGAGAAGCTAGAACATGAGTTCCCCGGATGCCTGGACATCTGTGGCGAGGGGACTCCCCAGGTCACCGGGTTCTTTG
AAGTGACGGTAGCCGGGAAGTTGGTTCACTCCAAGAAGAGAGGTGATGGCTACGTGGATACAGAGAGCAAGTTCCGGAAA
CTGGTGACTGCCATCAAAGCCGCCTTGGCTCAGTGCCAGTGA

Library Parental gene expression (RPM)
SRP017611_brain 100 .37 RPM
SRP017611_kidney 3 .14 RPM
SRP017611_liver 3 .23 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000015208 ortholog_one2one 1 retrogene
retro_amel_1135,
Bos taurus ENSBTAG00000008203 ortholog_one2one 2 retrogenes
retro_btau_1527, retro_btau_756,
Canis familiaris ENSCAFG00000004074 ortholog_one2one 1 retrogene
retro_cfam_1368,
Choloepus hoffmanni ENSCHOG00000013206 ortholog_one2many 2 retrogenes
retro_chof_1486, retro_chof_61,
Felis catus ENSFCAG00000015176 ortholog_one2many 2 retrogenes
retro_fcat_108, retro_fcat_186,
Mustela putorius furo ENSMPUG00000004433 ortholog_one2one 1 retrogene
retro_mputfur_326,
Ictidomys tridecemlineatus ENSSTOG00000001294 ortholog_one2one 1 retrogene
retro_itri_578,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_688 86.42 87.10
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2. retro_rnor_1819 55.71 75.27
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Download FASTA sequences of all ENSRNOG00000013548 retrocopies