Parental gene:

SERBP1, ENSPTRG00000023560

Aliases:None
Description:SERPINE1 mRNA binding protein 1 [Source:HGNC Symbol;Acc:17860]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:1:68026181..68045653(-)


>ENSPTRG00000023560
ATGCCTGGGCACTTACAGGAAGGCTTCGGCTGCGTGGTCACCAACCGATTCGACCAGTTATTTGACGACGAATCGGACCC
CTTCGAGGTGCTGAAGGCAGCAGAGAACAAGAAAAAAGAAGCCGGCGGGGGCGGCGTTGGGGGCCCTGGGGCCAAGAGCG
CAGCTCAGGCCGCGGCCCAGACCAACTCCAACGCGGCAGGCAAACAGCTGCGCAAGGAGTCCCAGAAAGACCGCAAGAAC
CCGCTGCCCCCCAGCGTTGGCGTGGTTGACAAGAAAGAGGAGACGCAGCCGCCCGTGGCGCTTAAGAAAGAAGGAATAAG
ACGAGTTGGAAGAAGACCTGATCAACAACTTCAGGGTGAAGGGAAAATAATTGATAGAAGACCAGAAAGGCGACCACCTC
GTGAACGAAGATTCGAAAAGCCACTTGAAGAAAAGGGTGAAGGAGGCGAATTTTCAGTTGATAGACCGATTATTGACCGA
CCTATTCGAGGTCGTGGTGGTCTTGGAAGAGGTCGAGGGGGCCGTGGACGTGGAATGGGCCGAGGAGATGGATTTGATTC
TCGTGGCAAACGTGAATTTGATAGGCATAGTGGAAGTGATAGATCTTCTTTTTCACATTACAGTGGCCTGAAGCACGAGG
ACAAACGTGGAGGTAGCGGATCTCACAACTGGGGAACTGTCAAAGACGAATTAACAGAGTCCCCCAAATACATTCAGAAA
CAAATATCTTATAATTACAGTGACTTGGATCAATCAAATGTGACTGAGGAAACACCTGAAGGTGAAGAACATCATCCAGT
GGCAGACACTGAAAATAAGGAGAATGAAGTTGAAGAGGTAAAAGAGGAGGGTCCAAAAGAGATGACTTTGGATGAGTGGA
AGGCTATTCAAAATAAGGACCGGGCAAAAGTAGAATTTAATATCCGAAAACCAAATGAAGGTGCTGATGGGCAGTGGAAG
AAGGGATTTGTTCTTCATAAATCAAAGAGTGAAGAGGCTCATGCTGAAGATTCGGTTATGGACCATCATTTCCGGAAGCC
AGCAAATGATATAACGTCTCAGCTGGAGATCAATTTTGGAGACCTTGGCCGCCCAGGACGTGGCGGCAGGGGAGGACGAG
GTGGACGTGGGCGTGGTGGGCGCCCAAACCGTGGCAGCAGGACCGACAAGTCAAGTGCTTCTGCTCCTGATGTGGATGAC
CCAGAGGCATTCCCAGCTCTGGCTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 54 .14 RPM
SRP007412_cerebellum 64 .53 RPM
SRP007412_heart 64 .76 RPM
SRP007412_kidney 76 .83 RPM
SRP007412_liver 84 .06 RPM
SRP007412_testis 128 .67 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000018538 ortholog_one2one 1 retrogene
retro_cfam_546,
Callithrix jacchus ENSCJAG00000017440 ortholog_one2one 2 retrogenes
retro_cjac_1207, retro_cjac_3015,
Homo sapiens ENSG00000142864 ortholog_one2one 3 retrogenes
retro_hsap_3056, retro_hsap_413, retro_hsap_4695,
Gorilla gorilla ENSGGOG00000010396 ortholog_one2one 1 retrogene
retro_ggor_408,
Myotis lucifugus ENSMLUG00000001424 ortholog_one2one 1 retrogene
retro_mluc_691,
Otolemur garnettii ENSOGAG00000025884 ortholog_one2one 1 retrogene
retro_ogar_185,
Tupaia belangeri ENSTBEG00000003689 ortholog_one2one 4 retrogenes
retro_tbel_1004, retro_tbel_1331, retro_tbel_2427, retro_tbel_532,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_317 66.03 50.49
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_ptro_1985 91.85 57.11
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPTRG00000023560 retrocopies