Parental gene:

PSAT1, ENSPTRG00000021045

Aliases:None
Description:phosphoserine aminotransferase 1 [Source:HGNC Symbol;Acc:19129]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:9:76934029..76966697(+)


>ENSPTRG00000021045
ATGGACGCCCCCAGGCAGGTGGTCAACTTTGGGCCTGGTCCCGCCAAGCTGCCGCACTCAGTGTTGTTAGAGATACAAAA
GGAATTATTAGACTACAAAGGAGTTGGCATTAGTGTTCTTGAAATGAGTCACAGGTCATCAGATTTTGCCAAGATTATTA
ACAATACAGAGAATCTTGTGCGGGAATTGCTAGCTGTTCCAGACAACTATAAGGTGATTTTTCTGCAAGGAGGTGGGTGC
GGCCAGTTCAGTGCTGTCCCCTTAAACCTCATTGGCTTGAAAGCGGGAAGGTGTGCGGACTATGTGGTGACAGGAGCTTG
GTCAGCTAAGGCCGCAGAAGAAGCCAAGAAGTTTGGGACTATAAATATCGTTCACCCTAAACTTGGGAGTTATACAAAAA
TTCCAGATCCAAGCACCTGGAACCTCAACCCAGATGCCTCCTACGTGTATTATTGCGCAAATGAGACGGTGCATGGTGTG
GAGTTTGACTTTATACCCGATGTCAAGGGAGCAGTACTGGTTTGTGACATGTCCTCAAACTTCCTGTCCAAGCCAGTGGA
TGTTTCCAAGTTTGGTGTGATTTTTGCTGGTGCCCAGAAGAATGTTGGCTCTGCTGGGGTCACCGTGGTGATTGTCCGTG
ATGACCTGCTGGGGTTTGCCCTCCGAGAGTGCCCCTCGGTCCTGGAATACAAGGTGCAGGCTGGAAACAGCTCCTTGTAC
AACACGCCTCCATGTTTCAGTTGTCCAGTGGAGCCCCAAAATAGAAGCAAGATGAATATTCCATTCCGCATTGGCAATGC
CAAAGGAGATGATGCTTTAGAAAAAAGATTTCTTGATAAAGCTCTTGAACTCAATATGTTGTCCTTGAAAGGGCATAGGT
CTGTGGGAGGCATCCGGGCCTCTCTGTATAATGCTGTCACAATTGAAGACGTTCAGAAGCTGGCCGCCTTCATGAAAAAA
TTTTTGGAGATGCATCAGCTATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 16 .02 RPM
SRP007412_cerebellum 14 .63 RPM
SRP007412_heart 0 .12 RPM
SRP007412_kidney 94 .64 RPM
SRP007412_liver 66 .22 RPM
SRP007412_testis 4 .85 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006898 ortholog_one2many 1 retrogene
retro_amel_375,
Bos taurus ENSBTAG00000013960 ortholog_one2one 1 retrogene
retro_btau_1658,
Canis familiaris ENSCAFG00000001570 ortholog_one2one 1 retrogene
retro_cfam_269,
Choloepus hoffmanni ENSCHOG00000003817 ortholog_one2one 1 retrogene
retro_chof_2702,
Callithrix jacchus ENSCJAG00000003319 ortholog_one2many 1 retrogene
retro_cjac_1203,
Echinops telfairi ENSETEG00000004158 ortholog_one2one 1 retrogene
retro_etel_99,
Homo sapiens ENSG00000135069 ortholog_one2one 3 retrogenes
retro_hsap_2267, retro_hsap_4054, retro_hsap_412,
Loxodonta africana ENSLAFG00000017917 ortholog_one2one 2 retrogenes
retro_lafr_1249, retro_lafr_660,
Macaca mulatta ENSMMUG00000011868 ortholog_one2many 2 retrogenes
retro_mmul_1029, retro_mmul_2341,
Mustela putorius furo ENSMPUG00000012566 ortholog_one2one 1 retrogene
retro_mputfur_808,
Nomascus leucogenys ENSNLEG00000002989 ortholog_one2one 3 retrogenes
retro_nleu_1010, retro_nleu_1288, retro_nleu_2805,
Oryctolagus cuniculus ENSOCUG00000007765 ortholog_one2one 1 retrogene
retro_ocun_1092,
Pongo abelii ENSPPYG00000019313 ortholog_one2one 3 retrogenes
retro_pabe_1950, retro_pabe_308, retro_pabe_3328,
Rattus norvegicus ENSRNOG00000013971 ortholog_one2one 1 retrogene
retro_rnor_1663,
Tupaia belangeri ENSTBEG00000012946 ortholog_one2one 1 retrogene
retro_tbel_1577,
Tarsius syrichta ENSTSYG00000000093 ortholog_one2one 2 retrogenes
retro_tsyr_1073, retro_tsyr_1212,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_316 93.12 66.90
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2. retro_ptro_1606 64.48 54.43
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Download FASTA sequences of all ENSPTRG00000021045 retrocopies