Parental gene:

AKR1B10, ENSPTRG00000019718

Aliases:None
Description:aldo-keto reductase family 1, member B10 (aldose reductase) [Source:HGNC Symbol;Acc:382]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:7:136008972..136022782(+)


>ENSPTRG00000019718
ATGGCCACGTTTGTGGAGCTCAGTACCAAAGCCAAGATGCCCATTGTGGGCCTGGGCACTTGGAAGTCTCCTCTCGGCAA
AGTGAAAGAAGCAGTGAAGGTGGCCATTGATGCAGGATATCAGCACATTGACTGTGCCTATGTCTATCAGAATGAACATG
AAGTCGGGGAAGCCATCCAAGAGAAGATCCAAGAGAAGGCTGTGAAGCGGGAGGACCTGTTCATCGTCAGCAAGTTGTGG
CCCACTTTCTTTGAGAGACCCCTTGTGAGGAAAGCCTTTGAGAAGACCCTCAAGGACCTGAAGCTGAGCTATCTGGACGT
CTATCTTATTCACTGGCCACAGGGATTCAAGTCTGGGGATGACCTTTTCCCCAAAGATGATAAAGGTAATGCCATCGGTG
GAAAAGCAACGTTCTTGGACGCCTGGGAGGCCATGGAGGAGCTGGTGGACGAGGGGCTGGTGAAAGCCCTTGGGGTCTCC
AATTTCAGCCACTTCCAGATCGAGAAGCTCTTGAACAAACCTGGACTGAAATATAAACCAGTGACTAACCAGGTTGAGTG
TCACCCATACCTCACACAGGAGAAACTGATCCAGTACTGCCACTCCAAGGGCATCACTGTTACAGCCTACAGCCCCCTGG
GCTCTCCGGATAGACCTTGGGCCAAGCCAGAAGACCCTTCCCTGCTGGAGGATCCCAAGATTAAGGAGATTGCTGCAAAG
CACAAAAAAACCACAGCCCAGGTTCTGATCCGTTTCCATATCCAGAGGAATGTGATTGTCATCCCCAAGTCTGTGACACC
AGCACGCATTGTTGAGAACATTCAGGTCTTTGACTTTAAATTGAGTGATGAGGAGATGGCAACCATACTCAGCTTCAACA
GAAACTGGAGGGCCTGTAACGTGTTGCAATCCTCTCATTTGGAAGACTATCCCTTCGATGCAGAATATTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 0 .09 RPM
SRP007412_cerebellum 0 .11 RPM
SRP007412_heart 0 .03 RPM
SRP007412_kidney 3 .77 RPM
SRP007412_liver 136 .04 RPM
SRP007412_testis 4 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000166 ortholog_one2many 1 retrogene
retro_chof_400,
Callithrix jacchus ENSCJAG00000012250 ortholog_one2many 1 retrogene
retro_cjac_3038,
Erinaceus europaeus ENSEEUG00000004422 ortholog_many2many 1 retrogene
retro_eeur_681,
Echinops telfairi ENSETEG00000006005 ortholog_one2many 3 retrogenes
retro_etel_1055, retro_etel_1643, retro_etel_748,
Homo sapiens ENSG00000198074 ortholog_one2one 1 retrogene
retro_hsap_581,
Macaca mulatta ENSMMUG00000013098 ortholog_many2many 2 retrogenes
retro_mmul_1357, retro_mmul_2455,
Mus musculus ENSMUSG00000029762 ortholog_many2many 1 retrogene
retro_mmus_627,
Mus musculus ENSMUSG00000052131 ortholog_many2many 1 retrogene
retro_mmus_2860,
Mus musculus ENSMUSG00000061758 ortholog_many2many 1 retrogene
retro_mmus_1490,
Nomascus leucogenys ENSNLEG00000013088 ortholog_one2one 1 retrogene
retro_nleu_801,
Pongo abelii ENSPPYG00000018018 ortholog_one2one 1 retrogene
retro_pabe_606,
Pan troglodytes ENSPTRG00000019716 within_species_paralog 6 retrogenes
retro_ptro_1365, retro_ptro_1794, retro_ptro_254, retro_ptro_3040, retro_ptro_3160, retro_ptro_972,
Pan troglodytes ENSPTRG00000019740 other_paralog 1 retrogene
retro_ptro_217,
Rattus norvegicus ENSRNOG00000009734 ortholog_many2many 3 retrogenes
retro_rnor_2380, retro_rnor_2588, retro_rnor_657,
Sorex araneus ENSSARG00000001396 ortholog_one2many 1 retrogene
retro_sara_608,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_428 90.25 100.00
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Download FASTA sequences of all ENSPTRG00000019718 retrocopies