Parental gene:

ENSETEG00000006005

Aliases:None
Description:None
Organism:Lesser hedgehog tenrec (Echinops telfairi)
Coordinates:GeneScaffold_8390:18588..30029(-)


>ENSETEG00000006005
ATGGCCACCTTCGTGGAGCTCCTCACCAAAGCCAAGATGCCCATCGTGGGCCTGGGCACCTGGAAGNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNGAGAAGCTCAAGGAGAAGGTGGTGAAGCGCGAGGACCTGTTCATCGTCAGCAAGCTGTGG
TCCACCTTCTTCGAGAGGCCCCTGGTGAAGGAAGCCTGCCGGAAGACCCTTAATGATCTGAAACTGGACTACCTGGACAT
CTACCTAATACACTGGCCTCAGGGCCTGAAGCCTGGGAAGGAGATCCTCCCTAAAGACGAAGCAGGCAACCTGCTCTGTT
GCAAGGCAACGTTCGTGGACGCCTGGGAGGCCATGGAGAAGCTGGTGGAGAGGCTGGTGAAAGCCTTTGGCGTCTCCATT
TTCAACCACTCCCAGATTGAGAGGCTCTGGAACAAGCCCGGACTGAAACACAAGCCAGTGATGAACCAGGTGGAGTGTCA
CCCATACCTCACGCAGGAGAAGCTGATCCAGTACTGCCATTCCAAGGGCATCGCAGTCACTGCCTACAGCCCCCTGGGCT
CTCCAGACAGACCTTGGGTCCAACCAGAGGACCCTTCACTGCTGGAACACCCCAAGATTAAGGAGATTGCCGCAAAGCAT
AACAAGACCCCTGCCCAGGTTCTGATCCGCTTCCATATCCAGAGGAATGTGGTTGTGATCCCCAAGTCTGTAACCCCCAA
ACGCATTGTTGAGAACTTCCAG

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000166 ortholog_one2one 1 retrogene
retro_chof_400,
Callithrix jacchus ENSCJAG00000012250 ortholog_one2one 1 retrogene
retro_cjac_3038,
Erinaceus europaeus ENSEEUG00000004422 ortholog_one2many 1 retrogene
retro_eeur_681,
Echinops telfairi ENSETEG00000006450 within_species_paralog 1 retrogene
retro_etel_1106,
Echinops telfairi ENSETEG00000009155 other_paralog 1 retrogene
retro_etel_352,
Homo sapiens ENSG00000198074 ortholog_one2many 1 retrogene
retro_hsap_581,
Macaca mulatta ENSMMUG00000013098 ortholog_one2many 2 retrogenes
retro_mmul_1357, retro_mmul_2455,
Mus musculus ENSMUSG00000029762 ortholog_one2many 1 retrogene
retro_mmus_627,
Mus musculus ENSMUSG00000052131 ortholog_one2many 1 retrogene
retro_mmus_2860,
Mus musculus ENSMUSG00000061758 ortholog_one2many 1 retrogene
retro_mmus_1490,
Nomascus leucogenys ENSNLEG00000013088 ortholog_one2one 1 retrogene
retro_nleu_801,
Pongo abelii ENSPPYG00000018018 ortholog_one2one 1 retrogene
retro_pabe_606,
Pan troglodytes ENSPTRG00000019718 ortholog_one2many 1 retrogene
retro_ptro_428,
Rattus norvegicus ENSRNOG00000009734 ortholog_one2many 3 retrogenes
retro_rnor_2380, retro_rnor_2588, retro_rnor_657,
Sorex araneus ENSSARG00000001396 ortholog_one2one 1 retrogene
retro_sara_608,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_etel_748 81.48 78.10
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2. retro_etel_1055 90.74 78.10
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3. retro_etel_1643 85.12 78.10
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Download FASTA sequences of all ENSETEG00000006005 retrocopies