Parental gene:

TMEM248, ENSPTRG00000019253

Aliases:None
Description:transmembrane protein 248 [Source:HGNC Symbol;Acc:25476]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:7:65422784..65457815(+)


>ENSPTRG00000019253
ATGTTCAGCATCAACCCCCTGGAGAACCTGAAGGTGTACATCAGCAGTCGGCCTCCCCTGGTGGTCTTCATGATCAGCGT
AAGCGCCATGGCCATAGCTTTCCTGACCCTGGGCTACTTCTTCAAAATCAAGGAGATTAAATCCCCAGAAATGGCAGAGG
ATTGGAATACTTTTCTGCTACGGTTCAATGATTTGGACTTGTGTGTATCAGAGAATGAAACGCTCAAGCATCTCACAAAC
GACACCACAACTCCGGAAAGTACAATGACCAGCGGGCAGGCCCGAGCTTCCACCCAGTCCCCCCAGGCCCTGGAGGACTC
GGGCCCGGTGAATATCTCAGTCTCAATCACCCTAACCCTGGACCCACTGAAACCCTTCGGAGGGTATTCCCGCAACGTCA
CCCATCTGTACTCAACCATCTTAGGGCATCAGATTGGACTTTCAGGCAGGGAAGCCCACGAGGAGATAAACATCACCTTC
ACCCTGCCTACAGCGTGGAGCTCAGACGACTGCGCCCTCCACGGTCACTGTGAGCAGGTGGTATTCACAGCCTGCATGAC
CCTCACGGCCAGCCCTGGGGTGTTCCCCGTCACTGTACAGCCACCGCACTGTGTTCCTGACACGTACAGCAACGCCACGC
TCTGGTACAAGATCTTCACAACTGCCAGAGATGCCAACACAAAATACGCCCAAGATTACAATCCTTTCTGGTGTTATAAG
GGGGCCATTGGAAAAGTCTATCATGCTTTAAATCCCAAGCTTACAGTGATTGTTCCAGATGATGACCGTTCATTAATAAA
TTTGCATCTCATGCACACCAGTTACTTCCTCTTTGTGATGGTGATAACAATGTTTTGCTATGCTGTTATCAAGGGCAGAC
CTAGCAAATTGCGTCAGAGCAATCCTGAATTTTGTCCCGAGAAGGTGGCTTTGGCTGAAGCCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 20 .54 RPM
SRP007412_cerebellum 29 .00 RPM
SRP007412_heart 13 .84 RPM
SRP007412_kidney 34 .91 RPM
SRP007412_liver 29 .23 RPM
SRP007412_testis 31 .51 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000004278 ortholog_one2one 1 retrogene
retro_cjac_2145,
Cavia porcellus ENSCPOG00000000830 ortholog_one2one 1 retrogene
retro_cpor_330,
Echinops telfairi ENSETEG00000015971 ortholog_one2one 1 retrogene
retro_etel_2097,
Homo sapiens ENSG00000106609 ortholog_one2one 1 retrogene
retro_hsap_3093,
Gorilla gorilla ENSGGOG00000022776 ortholog_one2one 1 retrogene
retro_ggor_2124,
Myotis lucifugus ENSMLUG00000000616 ortholog_one2one 1 retrogene
retro_mluc_1974,
Macaca mulatta ENSMMUG00000015843 ortholog_one2one 1 retrogene
retro_mmul_1973,
Nomascus leucogenys ENSNLEG00000013326 ortholog_one2one 1 retrogene
retro_nleu_2235,
Pteropus vampyrus ENSPVAG00000002978 ortholog_one2one 2 retrogenes
retro_pvam_988, retro_pvam_997,
Sorex araneus ENSSARG00000001884 ortholog_one2one 1 retrogene
retro_sara_563,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2089 76.82 70.06
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Download FASTA sequences of all ENSPTRG00000019253 retrocopies