Parental gene:

PLA2G12A, ENSPTRG00000016362

Aliases:None
Description:phospholipase A2, group XIIA [Source:HGNC Symbol;Acc:18554]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:4:112332918..112349401(-)


>ENSPTRG00000016362
ATGGCCCTGCTCTCGCGCCCCGCGCTCACCCTCCTGCTCCTCCTCATGGCCGCTGTTGTCAGGTGCCAGGAGCAGGCCCA
GACCACCGACTGGAGAGCCACCCTGAAGACCATCCGGAACGGCGTTCATAAGATAGACACGTACCTGAACGCCGCCTTGG
ACCTCCTGGGAGGCGAGGACGGTCTCTGCCAGTATAAATGCAATGACGGATCTAAGCCTTTCCCACGTTATGGTTATAAA
CCCTCCCCACCGAATGGATGTGGCTCTCCACTGTTTGGTGTTCATCTTAACATTGGTATCCCTTCCCTGACAAAGTGTTG
CAACCAACACGACAGGTGCTATGAGACCTGTGGCAAAAGCAAGAATGACTGTGATGAGGAATTCCAGTATTGCCTCTCCA
AGATCTGCCGAGATGTACAGAAAACACTAGGACTAACTCAGCATGTTCAGGCATGTGAAACAACAGTGGAGCTCTTGTTT
GACAGTGTTATACATTTAGGTTGTAAACCATATCTGGACAGCCAACGAGCCGCATGCAGGTGTCATTATGAAGAAAAAAC
TGATCTTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 6 .88 RPM
SRP007412_cerebellum 9 .82 RPM
SRP007412_heart 9 .71 RPM
SRP007412_kidney 15 .22 RPM
SRP007412_liver 5 .66 RPM
SRP007412_testis 6 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000015230 ortholog_one2one 1 retrogene
retro_btau_1557,
Callithrix jacchus ENSCJAG00000016169 ortholog_one2one 2 retrogenes
retro_cjac_1992, retro_cjac_3936,
Dasypus novemcinctus ENSDNOG00000016573 ortholog_one2one 7 retrogenes
retro_dnov_1694, retro_dnov_172, retro_dnov_1856, retro_dnov_1930, retro_dnov_2286, retro_dnov_2572, retro_dnov_434,
Homo sapiens ENSG00000123739 ortholog_one2one 1 retrogene
retro_hsap_153,
Gorilla gorilla ENSGGOG00000001082 ortholog_one2one 2 retrogenes
retro_ggor_242, retro_ggor_929,
Loxodonta africana ENSLAFG00000000852 ortholog_one2one 2 retrogenes
retro_lafr_402, retro_lafr_718,
Mustela putorius furo ENSMPUG00000008637 ortholog_one2one 1 retrogene
retro_mputfur_964,
Mus musculus ENSMUSG00000027999 ortholog_one2one 1 retrogene
retro_mmus_2368,
Otolemur garnettii ENSOGAG00000004686 ortholog_one2one 1 retrogene
retro_ogar_670,
Ochotona princeps ENSOPRG00000014505 ortholog_one2many 2 retrogenes
retro_opri_30, retro_opri_921,
Sus scrofa ENSSSCG00000009139 ortholog_one2one 3 retrogenes
retro_sscr_622, retro_sscr_623, retro_sscr_670,
Tarsius syrichta ENSTSYG00000004756 ortholog_one2one 4 retrogenes
retro_tsyr_1366, retro_tsyr_376, retro_tsyr_487, retro_tsyr_493,
Vicugna pacos ENSVPAG00000009842 ortholog_one2one 1 retrogene
retro_vpac_466,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_817 71.43 57.67
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Download FASTA sequences of all ENSPTRG00000016362 retrocopies