Parental gene:

ENOPH1, ENSPTRG00000016218

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:4:47552102..47582964(-)


>ENSPTRG00000016218
ATGGTCGTGCTTTCGGTCCCCGCCGAAGTCACCGTGATCCTGTTAGATATCGAAGGTACCACAACCCCGATTGCTTTCGT
GAAGGACATTTTATTTCCTTACATCGAAGAAAATGTTAAAGAATATCTGCAGACACATTGGGAAGAAGAGGAGTGCCAGC
AGGATGTCAGTCTTTTGAGGAAACAGGCTGAAGAGGACGCCCACCTGGATGGGGCTGTTCCTATCCCTGCAGCGTCTGGG
AATGGAGTGGATGATCTGCAACAGATGATCCAGGCCGTGGTAGATAATGTGTGCTGGCAGATGTCCCTGGATCGAAAGAC
CACTGCACTCAAACAGCTGCAGGGCCACATGTGGAGGGCGGCATTCACAGCTGGGCGCATGAAAGCAGAGTTCTTTGCAG
ATGTAGTTCCAGCAGTCAGGAAGTGGAGAGAGGCCGGAATGAAGGTGTACATCTATTCCTCAGGGAGTGTGGAGGCACAG
AAACTGTTATTCGGGCATTCTACGGAGGGAGATATTCTTGAGCTTGTTGATGGTCACTTTGATACCAAGATTGGACACAA
AGTAGAGAGTGAAAGTTACCGAAAGATTGCAGACAGCATTGGGTGCTCAACCAACAACATTTTGTTTCTGACAGATGTTA
CTCGAGAGGCCAGTGCTGCTGAGGAAGCAGATGTGCACGTAGCTGTGGTGGTGAGACCAGGCAACGCAGGATTAACAGAT
GATGAGAAGACTTACTACAGCCTCATCACATCCTTCAGTGAACTATACCTGCCTTCCTCAACCTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 46 .96 RPM
SRP007412_cerebellum 46 .03 RPM
SRP007412_heart 12 .45 RPM
SRP007412_kidney 20 .74 RPM
SRP007412_liver 11 .56 RPM
SRP007412_testis 14 .96 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000005140 ortholog_one2one 2 retrogenes
retro_amel_1186, retro_amel_930,
Choloepus hoffmanni ENSCHOG00000003283 ortholog_one2one 4 retrogenes
retro_chof_2150, retro_chof_470, retro_chof_486, retro_chof_596,
Callithrix jacchus ENSCJAG00000015251 ortholog_one2one 2 retrogenes
retro_cjac_1376, retro_cjac_2375,
Equus caballus ENSECAG00000019612 ortholog_one2one 1 retrogene
retro_ecab_164,
Erinaceus europaeus ENSEEUG00000004274 ortholog_one2many 1 retrogene
retro_eeur_563,
Homo sapiens ENSG00000145293 ortholog_one2one 1 retrogene
retro_hsap_2900,
Gorilla gorilla ENSGGOG00000003719 ortholog_one2one 1 retrogene
retro_ggor_2010,
Loxodonta africana ENSLAFG00000008619 ortholog_one2one 1 retrogene
retro_lafr_1158,
Macropus eugenii ENSMEUG00000011458 ortholog_one2one 1 retrogene
retro_meug_1125,
Myotis lucifugus ENSMLUG00000014460 ortholog_one2one 1 retrogene
retro_mluc_2504,
Otolemur garnettii ENSOGAG00000002502 ortholog_one2one 1 retrogene
retro_ogar_1549,
Pongo abelii ENSPPYG00000014887 ortholog_one2one 1 retrogene
retro_pabe_2399,
Tursiops truncatus ENSTTRG00000001800 ortholog_one2one 1 retrogene
retro_ttru_1231,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1960 82.05 59.77
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Download FASTA sequences of all ENSPTRG00000016218 retrocopies