Parental gene: | BRD7, ENSPTRG00000008103 |
| Aliases: | None |
| Description: | Bromodomain containing 7 [Source:UniProtKB/TrEMBL;Acc:K7B3V4] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 16:49303039..49353910(-) |
>ENSPTRG00000008103
ATGGGCAAGAAGCACAAGAAGCACAAGTCGGACAAACACCTCTACGAGGAGTATGTAGAGAAGCCCTTGAAGCTGGTCCT
CAAAGTAGGAGGGAACGAAGTCACTGAACTCTCCACGGGCAGCTCGGGGCACGACTCCAGCCTCTTCGAAGACAAAAACG
ATCATGACAAACACAAGGACAGAAAGCGGAAAAAGAGAAAGAAAGGAGAGAAGCAGATTCCAGGGGAAGAAAAGGGGAGA
AAACGGAGAAGAGTTAAGGAGGATAAAAAGAAGCGAGATCGAGACCGGGTGGAGAATGAGGCAGAAAAAGACCTCCAGTG
TCACGCCCCTGTGAGATTAGACTTGCCCCCTGAGAAGCCTCTCACAAGCTCTTTAGCCAAACAAGAAGAAGTAGAACAGA
CACCCCTTCAAGAAGCTTTGAATCAACTGATGAGACAATTGCAGAGAAAAGATCCAAGTGCTTTCTTTTCATTTCCTGTG
ACTGATTTTATTGCTCCTGGCTACTCCATGATCATTAAACACCCAATGGATTTTAGTACCATGAAAGAAAAGATCAAGAA
CAATGACTATCAGTCCATAGAAGAACTAAAGGATAACTTCAAACTAATGTGTACTAATGCCATGATTTACAATAAACCAG
AGACCATTTATTATAAAGCTGCAAAGAAGCTGTTGCACTCAGGAATGAAAATTCTTAGCCAGGAAAGAATTCAGAGCCTG
AAGCAGAGCATAGACTTCATGGCTGACTTGCAGAAAACTCGAAAGCAGAAAGATGGAACAGACACCTCACAGAGTGGGGA
GGACGGAGGCTGCTGGCAGAGAGAGAGAGAGGACTCTGGAGATGTCGAAGCACACGCCTTCAAGAGTCCCAGCAAAGAAA
ATAAAAAGAAAGACAAAGATATGCTTGAAGATAAGTTTAAAAGCAATAATTTAGAGAGAGAGCAGGAGCAGCTTGACCGC
ATCGTGAAGGAATCTGGAGGAAAGCTGACCAGGCGGCTTGTGAACAGTCAGTGCGAGTTTGAAAGAAGAAAACCAGATGG
AACAACGACGTTGGGACTTCTCCATCCTGTGGATCCCATTGTAGGAGAGCCAGGCTACTGCCCTGTGAGACTGGGAATGA
CAACTGGAAGACTTCAGTCTGGAGTGAATACTTTGCAGGGGTTCAAAGAGGATAAAAGGAACAAAGTCACTCCAGTGTTA
TATTTGAATTATGGGCCCTACAGTTCTTATGCACCACATTATGACTCCACATTTGCAAATATCAGCAAGGATGATTCTGA
TTTAATCTATTCAACCTATGGGGAAGACTCTGATCTTCCAAGTGATTTCAGCATCCATGAGTTTTTGGCCACGTGCCAAG
ATTATCCGTATGTCATGGCAGATAGTTTACTGGATGTTTTAACAAAAGGAGGGCATTCCAGGACCCTACAAGAGATGGAG
ATGTCATTGCCTGAAGGTGAAGGCCATACTAGGACACTTGACACAGCAAAAGAAATGGAGCAGATTACAGAAGTAGAGCC
ACCAGGGCGTTTGGACTCCAGTACTCAAGACAGGCTCATAGCGCTGAAAGCAGTAACAAATTTTGGCGTTCCAGTTGAAG
TTTTTGACTCTGAAGAAGCTGAAATATTCCAGAAGAAACTTGATGAGACCACCAGATTGCTCAGGGAACTCCAGGAAGCC
CAGAATGAACGTTTGAGCACCAGACCCCCTCCAAACATGATCTGTCTCTTGGGTCCCTCATACAGAGAAATGCATCTTGC
TGAACAAGTGACCAGTAATCTTAAAGAACTTGCACAGCAAGTAACTCCAGGTGATATCGTAAGCACGTATGGAGTTCGAA
AAGCAATGGGGATTTCCATTCCTTCCCCCGTCATGGAAAACAACTTTGTGGATTTGACAGAAGACACTGAAGAACCTAAA
AAGACGGATGTTGCTGAGTGTGGACCTGGTGGAAGTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 21 .81 RPM |
| SRP007412_cerebellum | 31 .91 RPM |
| SRP007412_heart | 26 .49 RPM |
| SRP007412_kidney | 33 .21 RPM |
| SRP007412_liver | 17 .48 RPM |
| SRP007412_testis | 74 .30 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000009355 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000001832 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000166164 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000014824 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000013057 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000011289 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000016688 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1840 | 92.08 | 98.62 | Please wait, loading  |
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| 2. | retro_ptro_2379 | 85.56 | 72.39 | Please wait, loading |
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| 3. | retro_ptro_2384 | 73.20 | 58.74 | Please wait, loading |
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Download FASTA sequences of all ENSPTRG00000008103 retrocopies