Parental gene:

ENSMODG00000013057

Aliases:None
Description:None
Organism:Opossum (Monodelphis domestica)
Coordinates:1:439350126..439395035(-)


>ENSMODG00000013057
ATGGGCAAGAAGCACAAGAAGCACAAGTCAGACAAGCACCTCTATGAGGAGTATGTAGAAAAACCTTTGAAGTTGGTACT
GAAAGTAGGAGGAAATGAAAAAATATTACAAGTAGCAAGAAAGAGAGAATACAAGTACCATGAAACCACAGTCAGGGTCA
CTCACTCACAATTTGGAAGCCACAAGGCTTCAAAGGAACAGAGGAGGAAAGAATATATGCAGTTGAGCCCAGAAATTAAA
CGACAGAGAAGCAGGAGGGAAAGGGAGGATAAAAGAAAGCGAGATCGGGATCGGGCTGAGAGTGAGGCAGAAAAAGAACT
TCAGTGTCAGACTCCTATACGACTAGAATTGCCCCCTGAGAAGCCTCTGACTAGTTCACTGTCCAAGCAAGAAGAAGTAG
AACAAACACCCCTTCAAGAGGCTTTGAATCAACTGATGAGGCAATTACAAAGAAAGGACCCAAGTGCTTTCTTTTCATTT
CCTGTGACTGATTTTATTGCTCCTGGCTACTCTATGATCATTAAACACCCAATGGATTTTAGTACTATGAAAGAGAAGAT
CAAGAACAATGACTACCAATCTATAGAAGAACTGAAGGAGAACTTCAAACTGATGTGTAGCAATGCAATGATTTACAATA
AACCGGAAACCATTTATTATAAAGCTGCAAAGAAGCTACTCCATTCAGGAATGAAAATTCTTAGTCAGGAAAGAATTCAG
AGCCTGAAACAGAGTATAGACTTCATGGCTGACTTGCAGAAGACCCGGAAGCAGAAAGACAAAATGGAAATACAGCAGAG
TGGGGAAGACAATGGCTATCTACTAAAAGATAAAGATGATTCTTTGGACAATGATATTAAAGTTTTCAAAAGTCCAAATA
AGGAAAATAAAAAGAAAGACAAAGATATGCTTGAAGATAAATTTAAAAACAATAACTTAGAAAGGGAACAAGAGCAAATT
GACCGTATTGTTAAAGAATCTGGGGGAAAGTTGACCAGAAGGCTTATAAATAGTCAGTGTGAGTTTGAAAGAAGAAAGCC
AGATGGAACCACAACATTAGGACTTCTTAATCCTGTGGACCCTATTGCAGGAGAACCTGGCTATTGTCCTGTAAGATTGG
GAATGACAACTGGAAGACTTCAGTCTGGAGTTAATACACTGCAGGGGTTCAAAGAGGACAAAAGGAATAAAGTTACTCCA
GTGTTATACTTGAATTATGGACCCTACAGTTCTTATGCACCAAACTATGATTCTACATTTGCAAATATCAGCAAGGATGA
TTCTGATTTAATCTACACAACTTATGGGGAAGATTCTAATCTTTCAGGTGGTTTCAGTATCCATGAGTTTTTGGCCACAT
CACAAGATTATCCATATGTTATGGCAGACAGTTTATTGGATGTTCTAACAAAAGGAGGACATTCTCGATCCCTCAGAGAG
CTTGAGACGGCAGCACCTGAAGGTGAAACCCAGAATGGTAGTCTTGACAGTGCAAAAGACATGGAGGTTACAGAAACAGA
CTCAGCTGGTTCTTTGGACTCTAGTACTAATAAGGACAGACTTACAGCACTAAAGGCAGTAACAAACTTTGGAGCCCAGA
TTGAGATTTTTGATTCTGAAGCAGAGGCTGAAGTATTCCAGAGAAAACTTGATGAAACCACTAAATTACTAAGAGAACTT
CAAGAGGCTCAGAATGAACGTCTGAGTACCAGACCTCCTCCTAATATGATTTGCCTTTTGGGACCATCTTACAGAGAAAT
GCATTTGGCTGAACAGGTGACCAACAATCTAAAAGAACTTGCACAGCAAGTAACTCCAGGTGACATAGTAAGCATGTATG
GAATCCGGAAAGCAATGGGGATTTCCATTCCTTCTCCTGTCATAGACAACAGCTTCATAGATTTAACAGAAGATCTTGAA
GAACCAAAAAAAATCAGCACCACTGAATGTGGGGGATCTGATGGA

Library Parental gene expression (RPM)
SRP007412_brain 97 .15 RPM
SRP007412_cerebellum 62 .03 RPM
SRP007412_heart 38 .67 RPM
SRP007412_kidney 90 .86 RPM
SRP007412_liver 67 .97 RPM
SRP007412_testis 145 .75 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000009355 ortholog_one2many 1 retrogene
retro_chof_2431,
Callithrix jacchus ENSCJAG00000001832 ortholog_one2many 1 retrogene
retro_cjac_2372,
Homo sapiens ENSG00000166164 ortholog_one2many 2 retrogenes
retro_hsap_2723, retro_hsap_3507,
Gorilla gorilla ENSGGOG00000014824 ortholog_many2many 2 retrogenes
retro_ggor_1895, retro_ggor_2372,
Otolemur garnettii ENSOGAG00000011289 ortholog_one2many 2 retrogenes
retro_ogar_326, retro_ogar_438,
Pan troglodytes ENSPTRG00000008103 ortholog_one2many 3 retrogenes
retro_ptro_1840, retro_ptro_2379, retro_ptro_2384,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_152 98.52 61.83
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Download FASTA sequences of all ENSMODG00000013057 retrocopies