Parental gene:

ILF2, ENSPTRG00000001358

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:1:131908381..131917267(-)


>ENSPTRG00000001358
ATGAGGGGTGACAGAGGCCGTGGTCGTGGTGGGCGCTTTGGTTCCAGAGGAGGCCCAGGAGGAGGGTTCAGGCCCTTTGT
ACCACATATCCCATTTGACTTCTATTTGTGTGAAATGGCCTTTCCCCGGGTCAAGCCAGCACCTGATGAAACTTCCTTCA
GTGAGGCCTTGCTGAAGAGGAATCAGGACCTGGCTCCCAATTCTGCTGAACAGGCATCTATCCTTTCTCTGGTGACAAAA
ATAAACAATGTGATTGATAATCTGATTGTGGCTCCAGGGACATTTGAAGTGCAAATTGAAGAAGTTCGACAGGTGGGATC
CTATAAAAAGGGGACAATGACTACAGGACACAATGTGGCTGACCTGGTGGTGATACTCAAGATTCTGCCAACGTTGGAAG
CTGTTGCTGCCCTGGGGAACAAAGTCGTGGAAAGCCTAAGAGCACAGGATCCTTCTGAAGTTTTAACCATGCTGACCAAC
GAAACTGGCTTTGAAATCAGTTCTTCTGATGCTACAGTGAAGATTCTCATTACAACAGTGCCACCCAATCTTCGAAAACT
GGATCCAGAACTCCATTTGGATATCAAAGTATTGCAGAGTGCCTTAGCAGCCATCCGACATGCCCGCTGGTTCGAGGAAA
ATGCTTCTCAGTCCACAGTTAAAGTTCTCATCAGACTACTGAAGGACTTGAGGATTCGTTTTCCTGGCTTTGAGCCCCTG
ACACCCTGGATCCTTGACCTACTAGGCCATTATGCTGTGATGAACAACCCCACCAGACAGCCTTTGGCCCTAAACGTTGC
ATACAGGCGCTGCTTGCAGATTCTGGCTGCAGGACTGTTCCTGCCAGGTTCAGTGGGTATCACTGACCCCTGTGAGAGTG
GCAACTTTAGAGTACACACAGTCATGACCCTAGAACAGCAGGACATGGTCTGCTATACAGCTCAGACTCTCGTCCGAATC
CTCTCACATGGTGGCTTTAGGAAGATCCTTGGCCAGGAGGGTGATGCCAGCTATCTTGCTTCTGAAATATCTACCTGGGA
TGGAGTGATAGTAACACCTTCAGAAAAGGCTTATGAGAAGCCACCAGAGAAGAAGGAAGGAGAGGAAGAAGAGGAGAATA
CAGAAGAACCACCTCAAGGAGAGGAAGAAGAAAGCATGGAAACTCAGGAGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 50 .10 RPM
SRP007412_cerebellum 66 .43 RPM
SRP007412_heart 36 .43 RPM
SRP007412_kidney 157 .33 RPM
SRP007412_liver 55 .91 RPM
SRP007412_testis 240 .06 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000017530 ortholog_one2one 1 retrogene
retro_cfam_1358,
Macropus eugenii ENSMEUG00000003651 ortholog_one2one 1 retrogene
retro_meug_1174,
Myotis lucifugus ENSMLUG00000001847 possible_ortholog 3 retrogenes
retro_mluc_1046, retro_mluc_217, retro_mluc_2402,
Macaca mulatta ENSMMUG00000008149 ortholog_one2one 1 retrogene
retro_mmul_1516,
Ictidomys tridecemlineatus ENSSTOG00000000667 possible_ortholog 1 retrogene
retro_itri_130,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_963 72.95 52.56
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2. retro_ptro_1789 83.17 51.03
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Download FASTA sequences of all ENSPTRG00000001358 retrocopies