Parental gene:

G3BP1, ENSPPYG00000015968

Aliases:G3BP1, G3BP
Description:Ras GTPase-activating protein-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q5RB87]
Organism:Orangutan (Pongo abelii)
Coordinates:5:153825928..153860241(+)


>ENSPPYG00000015968
ATGGTGATGGAGAAGCCTAGTCCCCTGCTGGTCGGGCGGGAATTTGTGAGACAGTATTACACCCTGCTGAACCAGGCCCC
AGACATGCTGCATAGATTTTATGGAAAGAACTCTTCTTATGTCCATGGGGGATTGGATTCAAATGGAAAGCCAGCAGATG
CAGTCTACGGACAGAAAGAAATCCACAGGAAAGTGATGTCACAAAACTTCACCAACTGCCACACCAAGATTCGCCATGTT
GATGCTCATGCCACGCTAAATGATGGTGTGGTAGTCCAGGTGATGGGGCTTCTCTCTAACAACAACCAGGCTTTGAGGAG
ATTCATGCAAACGTTTGTCCTTGCTCCTGAGGGGTCTGTTGCAAATAAATTCTATGTTCACAATGATATCTTCAGATACC
AAGATGAGGTCTTTGGTGGGTTTGTCACTGAGCCTCAGGAGGAGTCTGAAGAAGAAGTAGAGGAACCTGAAGAAAGACAG
CAAACACCTGAGGTGGTACCTGATGATTCTGGAACTTTCTATGATCAGGCAGTTGTCAGTAATGACATGGAAGAACATTT
AGAGGAGCCTGTTGCTGAACCAGAGCCTGATCCTGAACCAGAACCAGAACAAGAACCTGTATCTGAAATCCAAGAGGAAA
AGCCTGAGCCAGTATTAGAAGAAACTGTCCCTGAGGATGCTCAGAAGAGTTCTTCTCCAGCACCTGCAGACATAGCTCAG
ACAGTACAGGAAGACTTGAGGACATTTTCTTGGGCATCTGTGACCAGTAAGAATCTTCCACCCAGTGGAGCTGTTCCAGT
TACTGGGATACCACCTCATGTTGTTAAAGTACCAGCTTCACAGCCCCGTCCAGAGTCTAAGCCTGAATCTCAGATTCCAC
CACAGAGACCTCAACGGGATCAAAGAGTGCGAGAACAACGAATAAATATTCCTCCCCAAAGGGGACCCAGACCAATCCGT
GAGGCTGGTGAGCAAGGTGACATTGAACCCCGAAGAATGGTGAGACACCCTGACAGTCACCAACTCTTCATCGGCAACCT
GCCTCATGAAGTGGACAAATCAGAGCTTAAAGATTTCTTTCAAAGTTATGGAAACGTGGTGGAGTTGCGCATTAACAGTG
GTGGGAAATTACCCAATTTTGGTTTTGTTGTGTTTGATGATTCTGAGCCTGTTCAGAAAGTCCTTAGCAACAGGCCCATC
ATGTTCAGAGGTGAGGTCCGTCTGAATGTCGAAGAGAAGAAGACTCGAGCTGCCAGGGAAGGCGACCGACGAGATAATCG
CCTTCGGGGACCTGGAGGCCCTCGAGGTGGGCTGGGTGGTGGAATGAGAGGCCCTCCCCGTGGAGGCATGGTGCAGAAAC
CAGGATTTGGAGTGGGAAGGGGGCTTGCGCCACGGCAGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 31 .96 RPM
SRP007412_cerebellum 26 .87 RPM
SRP007412_heart 45 .82 RPM
SRP007412_kidney 55 .22 RPM
SRP007412_liver 66 .07 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000006626 possible_ortholog 2 retrogenes
retro_cpor_1119, retro_cpor_464,
Dasypus novemcinctus ENSDNOG00000018758 ortholog_one2one 3 retrogenes
retro_dnov_1492, retro_dnov_1632, retro_dnov_526,
Homo sapiens ENSG00000145907 ortholog_one2one 1 retrogene
retro_hsap_2322,
Microcebus murinus ENSMICG00000012235 ortholog_one2one 2 retrogenes
retro_mmur_1247, retro_mmur_1469,
Mustela putorius furo ENSMPUG00000013661 ortholog_one2one 1 retrogene
retro_mputfur_625,
Oryctolagus cuniculus ENSOCUG00000022143 possible_ortholog 1 retrogene
retro_ocun_1352,
Otolemur garnettii ENSOGAG00000001726 ortholog_one2one 2 retrogenes
retro_ogar_3156, retro_ogar_3183,
Pan troglodytes ENSPTRG00000017438 ortholog_one2one 1 retrogene
retro_ptro_1696,
Pteropus vampyrus ENSPVAG00000017250 ortholog_one2one 2 retrogenes
retro_pvam_1188, retro_pvam_188,
Rattus norvegicus ENSRNOG00000013186 possible_ortholog 1 retrogene
retro_rnor_1282,
Tarsius syrichta ENSTSYG00000004570 ortholog_one2one 1 retrogene
retro_tsyr_1391,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2104 84.71 51.72
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Download FASTA sequences of all ENSPPYG00000015968 retrocopies