Parental gene: | AP2B1, ENSPPYG00000008188 |
| Aliases: | None |
| Description: | AP-2 complex subunit beta [Source:RefSeq peptide;Acc:NP_001126334] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 17:30355634..30499388(+) |
>ENSPPYG00000008188
ATGACTGACTCCAAGTATTTCACAACCAATAAAAAAGGAGAAATATTTGAACTAAAAGCTGAACTCAACAATGAAAAGAA
AGAAAAGAGAAAGGAGGCTGTGAAGAAAGTGATTGCTGCTATGACCGTGGGGAAGGATGTTAGTTCTCTCTTTCCAGACG
TAGTGAACTGTATGCAGACTGACAATCTGGAACTAAAGAAGCTTGTGTATCTCTACTTGATGAACTATGCCAAGAGTCAG
CCAGACATGGCCATCATGGCTGTAAACAGCTTTGTGAAGGACTGTGAAGATCCTAATCCTTTGATTCGAGCCTTGGCAGT
CAGAACCATGGGGTGCATCCGGGTAGATAAAATTACAGAATATCTCTGTGAGCCGCTCCGCAAGTGCTTGAAGGATGAGG
ATCCCTATGTTCGGAAAACAGCAGCAGTCTGTGTGGCAAAACTCCATGATATCAATGCCCAAATGGTGGAAGATCAGGGA
TTTCTGGATTCTCTACGGGATCTCATAGCAGATTCAAATCCAATGGTGGTGGCTAATGCCGTAGCAGCATTATCTGAAAT
CAGTGAGTCTCACCCAAACAGCAACTTACTTGATCTGAACCCACAGAACATTAATAAGCTGTTGACAGCCCTGAATGAAT
GCACTGAATGGGGCCAGATTTTCATCCTGGACTGCCTGTCTAATTACAACCCTAAAGATGATCGGGAGGCTCAGAGCATC
TGTGAGCGGGTAACTCCCCGGCTATCCCATGCCAACTCAGCAGTGGTGCTTTCAGCGGTAAAAGTCCTAATGAAGTTTCT
AGAATTGTTACCTAAGGATTCTGACTACTACAATATGCTGCTGAAGAAGTTAGCCCCTCCACTTGTCACTTTGCTGTCTG
GGGAGCCAGAAGTGCAGTATGTCGCCCTGAGGAACATCAACTTAATTGTCCAGAAAAGGCCTGAAATCTTGAAGCAGGAA
ATCAAAGTCTTTTTTGTGAAGTACAATGATCCCATCTATGTTAAACTAGAGAAGTTGGACATCATGATTCGTTTGGCATC
TCAAGCCAACATTGCTCAGGTTCTGGCAGAACTGAAAGAATATGCTACAGAGGTGGATGTTGACTTTGTTCGAAAAGCTG
TGCGGGCCATTGGACGGTGTGCCATCAAGGTGGAGCAATCTGCAGAGCGCTGTGTAAGCACATTGCTTGATCTAATCCAG
ACCAAAGTGAATTATGTGGTCCAAGAAGCAATTGTTGTCATCAGGGACATCTTCCGCAAATACCCCAACAAGTATGAAAG
TATCATTGCCACTCTATGTGAGAACTTAGACTCGCTGGATGAGCCAGATGCTCGAGCAGCTATGATTTGGATTGTGGGAG
AATATGCTGAAAGAATTGACAATGCAGATGAGTTACTAGAAAGCTTCCTGGAGGGTTTTCACGATGAAAGCACCCAGGTG
CAGCTCACTCTGCTTACTGCCATAGTGAAGCTGTTTCTCAAGAAACCATCAGAAACACAGGAGCTAGTCCAGCAGGTCTT
GAGTTTGGCAACACAGGATTCTGATAATCCTGACCTTCGAGACCGGGGCTATATTTATTGGCGCCTTCTCTCAACTGACC
CTGTCACAGCTAAAGAAGTAGTCTTGTCTGAGAAGCCACTGATCTCTGAGGAGACAGACCTTATTGAGCCAACTCTGCTG
GATGAGCTAATCTGCCACATTGGTTCTTTGGCCTCTGTGTATCATAAGCCTCCCAATGCTTTTGTGGAAGGAAGTCATGG
AATTCATCGTAAACACTTGCCAATTCATCATGGGAGCATTGATGCAGGTGACAGCCCTGTTGGCACTACCACTGCAACGA
ACCTGGAACAGCCTCAGGTTATCCCCTCTCAAGGTGATCTTCTAGGGGATCTTTTAAACCTTGACCTCGGTCCCCCAGTC
AATGTGCCACAGGTGTCCTCCATGCAGATGGGAGCAGTGGATCTCCTAGGAGGAGGACTAGATAGTCTGCTTGGCAGTGA
CCTTGGCGGGGGCATTGGAGGAAGTCCGGCAGTGGGACAATCCTTCATCCCATCATCGGTGCCTGCAACCTTTGCTCCTT
CACCTACACCTGCTGTGGTCAGCAGTGGACTGAATGACCTGTTTGAACTCTCCACAGGGATAGGCATGGCACCCGGTGGA
TATGTGGCTCCTAAGGCTGTCTGGCTACCTGCAGTAAAGGCTAAAGGCTTGGAGATTTCAGGAACATTTACTCACCGCCA
AGGGCACATCTATATGGAAATGAACTTCACCAATAAAGCTCTGCAGCACATGACAGATTTTGCAATCCAGTTTAACAAAA
ATAGCTTTGGTGTCATCCCCAGCACTCCTCTGGCCATCCATACACCACTGATGCCAAACCAGAGCATTGATGTCTCCCTG
CCTCTCAATACTTTGGGCCCAGTCATGAAGATGGAACCTCTGAATAACCTCCAGGTGGCTGTGAAAAACAATATCGATGT
CTTCTACTTCAGCTGCCTCATCCCACTCAATGTGCTTTTTGTAGAAGATGGCAAAATGGAGCGCCAGGTCTTCCTTGCAA
CATGGAAGGATATTCCCAATGAAAACGAACTTCAGTTTCAGATTAAGGAATGTCATTTAAATGCTGACACTGTTTCCAGC
AAGTTGCAAAACAACAATGTTTATACTATTGCCAAGAGGAATGTGGAAGGGCAGGACATGCTGTACCAATCCCTGAAGCT
CACTAATGGCATTTGGATTTTGGCCGAACTACGTATCCAGCCGGGAAACCCCAATTACACGCTGTCACTGAAGTGTAGAG
CTCCTGAAGTCTCTCAATACATCTATCAGGTCTACGACAGCATTCTGAAAAACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 406 .39 RPM |
| SRP007412_cerebellum | 255 .00 RPM |
| SRP007412_heart | 53 .70 RPM |
| SRP007412_kidney | 133 .91 RPM |
| SRP007412_liver | 62 .67 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000014853 | possible_ortholog | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000015777 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000002837 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000035152 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000013939 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000009021 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000009988 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_3793 | 88.74 | 69.93 | Please wait, loading  |
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Download FASTA sequences of all ENSPPYG00000008188 retrocopies