Parental gene:

Ap2b1, ENSMUSG00000035152

Aliases:Ap2b1, 1300012O03Rik, AI788979
Description:adaptor-related protein complex 2, beta 1 subunit [Source:MGI Symbol;Acc:MGI:1919020]
Organism:Mouse (Mus musculus)
Coordinates:11:83299023..83405035(+)


>ENSMUSG00000035152
ATGACTGACTCCAAGTACTTCACAACCAATAAGAAGGGAGAAATTTTTGAATTAAAAGCTGAACTCAACAATGAAAAGAA
AGAAAAGAGGAAGGAGGCTGTGAAGAAAGTGATTGCTGCTATGACCGTGGGGAAGGACGTGAGCTCTCTCTTCCCAGATG
TGGTGAACTGCATGCAGACTGACAACCTGGAACTAAAGAAGCTCGTGTACCTCTATCTGATGAACTATGCCAAGAGTCAG
CCAGACATGGCCATCATGGCTGTCAACAGCTTTGTGAAGGATTGTGAAGATCCCAATCCTTTGATTCGAGCCTTGGCAGT
TAGAACCATGGGATGCATCCGGGTGGACAAGATTACAGAGTATCTCTGTGAACCCCTCCGCAAGTGCTTGAAGGATGAAG
ACCCCTATGTTCGGAAAACGGCAGCAGTATGCGTGGCAAAACTCCATGATATCAATGCCCAGATGGTGGAAGATCAGGGA
TTTCTGGATTCTCTGCGGGATCTCATAGCAGATTCAAACCCAATGGTGGTGGCTAATGCTGTAGCAGCATTGTCTGAGAT
CAGTGAGTCTCACCCAAACAGCAACTTACTTGATCTGAACCCTCAGAATATCAATAAGCTGCTCACAGCCCTGAATGAAT
GCACTGAATGGGGCCAGATTTTCATCCTGGACTGCCTGTCTAATTACAACCCTAAAGATGACCGGGAAGCTCAGAGCATC
TGTGAGCGAGTAACGCCTCGGCTCTCCCACGCCAACTCTGCAGTGGTGCTTTCAGCCGTAAAAGTCCTAATGAAGTTTCT
AGAATTGTTGCCCAAGGACTCTGACTACTACAATATGCTGCTAAAGAAGTTAGCACCTCCACTTGTCACGTTGCTGTCTG
GGGAGCCAGAAGTACAGTACGTCGCCCTGAGGAACATCAACCTAATTGTCCAGAAAAGGCCTGAAATCTTGAAGCAGGAA
ATCAAGGTCTTCTTTGTGAAGTACAATGATCCTATCTATGTTAAACTAGAGAAGTTAGACATCATGATTCGTCTTGCATC
CCAAGCCAACATTGCTCAGGTTCTGGCGGAGCTGAAGGAATATGCCACTGAAGTTGATGTGGACTTTGTTCGCAAAGCTG
TGAGGGCCATTGGACGGTGTGCCATCAAAGTGGAGCAATCAGCAGAACGCTGTGTAAGCACACTGCTTGATCTAATCCAG
ACCAAAGTAAATTATGTGGTCCAAGAGGCAATTGTTGTCATCAGGGACATCTTCCGAAAATACCCCAACAAGTATGAAAG
TATTATTGCCACCCTCTGTGAAAACTTGGACTCCCTGGATGAACCCGATGCCCGAGCAGCTATGATTTGGATTGTAGGAG
AATATGCTGAAAGAATCGATAACGCAGATGAATTACTAGAGAGTTTCCTGGAAGGTTTTCATGACGAAAGCACCCAGGTG
CAGCTCACACTGCTCACCGCCATAGTGAAGCTGTTTCTCAAGAAGCCATCAGAAACACAGGAGCTGGTCCAACAGGTCTT
GAGCTTAGCCACACAGGACTCCGATAACCCTGACCTTCGAGATCGGGGTTATATATATTGGCGCCTTCTTTCAACTGACC
CTGTGACAGCCAAAGAAGTGGTGTTGTCTGAGAAGCCATTGATCTCTGAGGAGACAGACCTCATTGAGCCTACCCTCCTG
GATGAGCTCATCTGCCACATTGGTTCTTTGGCCTCTGTGTACCACAAACCTCCAAATGCTTTTGTGGAAGGGAGTCATGG
GATTCATCGCAAACACTTGCCAATTCATCATGGGAGCACTGATGCAGGTGATAGCCCCGTTGGCACCACCACTACAACCA
ACCTGGAGCAGCCTCAGGTCATTCCCTCTCAAGGTGACCTTCTGGGGGATCTTTTGAATCTTGACCTGGGTCCCCCAGTG
AATGTCCCGCAAGTGTCCTCCATGCAGATGGGAGCGGTGGATCTTTTAGGAGGAGGACTGGATAGCCTGCTTGGCAGTGA
CCTTGGCGGGGGCATTGGAGGAAGTCCGGCAGTAGGACAGTCCTTCATCCCGTCATCAGTGCCTGCGACCTTCGCTCCTT
CACCTACTCCTGCTGTGGTCAGCAGTGGTCTGAATGACCTGTTTGAGCTTTCCACTGGGATAGGCATGGCACCTGGCGGA
TATGTGGCTCCTAAGGCGGTCTGGCTACCTGCAGTAAAGGCTAAAGGCTTGGAGATTTCGGGGACGTTTACTCACCGCCA
AGGGCATATCTATATGGAAATGAACTTCACCAACAAAGCTCTGCAGCATATGACAGACTTTGCCATCCAGTTTAACAAGA
ATAGCTTCGGTGTCATCCCAAGCACTCCCTTGGCCATACATACTCCACTGATGCCAAACCAGAGCATTGACGTCTCTCTG
CCGCTCAACACCTTGGGCCCAGTCATGAAGATGGAGCCCCTGAATAACCTGCAGGTGGCTGTTAAAAACAATATTGATGT
CTTCTACTTCAGCTGCCTCATCCCACTCAATGTGCTTTTTGTAGAAGATGGCAAAATGGAGCGCCAGGTCTTCCTTGCAA
CGTGGAAGGATATTCCCAATGAAAATGAACTCCAGTTTCAGATTAAGGAATGTCATTTAAATGCTGACACAGTTTCCAGC
AAGTTGCAAAACAACAATGTTTACACTATTGCCAAGAGGAACGTGGAAGGGCAGGACATGCTGTACCAGTCCCTGAAGCT
CACTAATGGCATTTGGATTTTGGCAGAGCTGCGGATCCAGCCAGGAAACCCCAATTATACGCTGTCGCTGAAGTGTAGAG
CCCCTGAAGTCTCTCAGTACATCTATCAGGTCTACGACAGCATTTTGAAAAACTAA

Library Parental gene expression (RPM)
SRP007412_brain 408 .48 RPM
SRP007412_cerebellum 302 .65 RPM
SRP007412_heart 66 .06 RPM
SRP007412_kidney 127 .03 RPM
SRP007412_liver 70 .40 RPM
SRP007412_testis 626 .12 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000014853 possible_ortholog 1 retrogene
retro_cjac_1850,
Loxodonta africana ENSLAFG00000015777 ortholog_one2one 1 retrogene
retro_lafr_446,
Myotis lucifugus ENSMLUG00000002837 possible_ortholog 1 retrogene
retro_mluc_2443,
Nomascus leucogenys ENSNLEG00000013939 ortholog_one2one 2 retrogenes
retro_nleu_1925, retro_nleu_2554,
Pongo abelii ENSPPYG00000008188 ortholog_one2one 1 retrogene
retro_pabe_3793,
Pan troglodytes ENSPTRG00000009021 ortholog_one2one 1 retrogene
retro_ptro_3248,
Rattus norvegicus ENSRNOG00000009988 ortholog_one2one 2 retrogenes
retro_rnor_1267, retro_rnor_574,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_2503 84.21 53.63
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Download FASTA sequences of all ENSMUSG00000035152 retrocopies