Parental gene:

ENSOGAG00000013616

Aliases:None
Description:None
Organism:Bushbaby (Otolemur garnettii)
Coordinates:GL873522.1:5720274..5737274(-)


>ENSOGAG00000013616
ATGGAAGATTCGATGGACATGGACATGAGCCCCTTGAGGCCTCAGAACTATCTTTTCGGTTGTGAACTAAAGGCCGACAA
AGATTATCACTTTAAGGTGGATAATGATGAAAATGAGCACCAGTTATCTTTAAGAACGGTCAGTTTAGGGGCTGGTGCAA
AGGATGAGTTGCACATTGTTGAAGCAGAGGCAATGAATTATGAAGGGAGTCCAATTAAAGTAACATTGGCAACTTTGAAA
ATGTCCGTACAGCCAACGGTTTCTCTTGGGGGATTTGAAATAACACCACCTGTGGTCTTACGGTTGAAGTGCGGTTCAGG
GCCTGTGCATATTAGTGGGCAGCACTTAGTAGCTGTGGAAGAAGATGCAGAATCAGAAGATGAAGAGGAGGAGGATGTGA
AACTCCTAAGTATGTCTGGAAAGCGATCTGCCCCTGGAAGTGGTAGCAAAGTTCCACAGAAAAAAGTAAAACTTGCTGCA
GATGAAGATGACGATGATGATGAAGATGATGATGACGATGATGAAGATGATGATGATGATGATGATTTTGATGATGAGGA
AACTGAAGAAAAAGCTCCAGTGAAGAAATCTGTGCGAGACACTCCAGCCAAAAATGCACAAAAATCAAACCAGAATGGAA
AGGATTCAAAACCATCAACACCGAGATCAAAAAATAAGGGTCAAGAATCCTTCAAAAAACAGGAAAAAACTCCTAAAACA
CCAAAAGGACCTAGTTCAGTAGAAGACATTAAGGCAAAAATGCAAGCAAGTATAGAAAAAGGTGGGTCTCTTCCCAAAGT
GGAAGCCAAGTTCATCAATTATGTGAAGAATTGCTTCAGGATGACTGACCAGGAGGCTATTCAAGATCTCTGGCAGTGGA
GGAAGTCTCTTTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003910 possible_ortholog 1 retrogene
retro_amel_983,
Bos taurus ENSBTAG00000015316 possible_ortholog 2 retrogenes
retro_btau_538, retro_btau_56,
Canis familiaris ENSCAFG00000016912 possible_ortholog 3 retrogenes
retro_cfam_22, retro_cfam_286, retro_cfam_900,
Callithrix jacchus ENSCJAG00000019334 possible_ortholog 13 retrogenes
retro_cjac_1559, retro_cjac_1682, retro_cjac_1696, retro_cjac_1733, retro_cjac_2075, retro_cjac_2351, retro_cjac_2368, retro_cjac_2533, retro_cjac_2605, retro_cjac_3270, retro_cjac_3416, retro_cjac_4117, retro_cjac_838,
Equus caballus ENSECAG00000021950 possible_ortholog 4 retrogenes
retro_ecab_1016, retro_ecab_1100, retro_ecab_393, retro_ecab_544,
Felis catus ENSFCAG00000030268 possible_ortholog 3 retrogenes
retro_fcat_156, retro_fcat_376, retro_fcat_720,
Homo sapiens ENSG00000181163 possible_ortholog 30 retrogenes
retro_hsap_1275, retro_hsap_129, retro_hsap_1526, retro_hsap_1580, retro_hsap_1593, retro_hsap_1621, retro_hsap_2226, retro_hsap_2375, retro_hsap_2478, retro_hsap_2856, retro_hsap_2862, retro_hsap_3355, retro_hsap_3460, retro_hsap_3609, retro_hsap_3636, retro_hsap_3718, retro_hsap_3776, retro_hsap_3808, retro_hsap_3817, retro_hsap_3822, retro_hsap_3962, retro_hsap_4666, retro_hsap_4753, retro_hsap_4785, retro_hsap_614, retro_hsap_638, retro_hsap_690, retro_hsap_717, retro_hsap_785, retro_hsap_961,
Gorilla gorilla ENSGGOG00000007220 ortholog_one2many 12 retrogenes
retro_ggor_1543, retro_ggor_1660, retro_ggor_1976, retro_ggor_2453, retro_ggor_2454, retro_ggor_2539, retro_ggor_2559, retro_ggor_2571, retro_ggor_2681, retro_ggor_2959, retro_ggor_560, retro_ggor_591,
Macaca mulatta ENSMMUG00000015781 ortholog_one2many 1 retrogene
retro_mmul_203,
Mus musculus ENSMUSG00000057113 possible_ortholog 5 retrogenes
retro_mmus_1301, retro_mmus_1798, retro_mmus_3131, retro_mmus_539, retro_mmus_550,
Pongo abelii ENSPPYG00000016037 possible_ortholog 7 retrogenes
retro_pabe_2405, retro_pabe_3072, retro_pabe_3261, retro_pabe_3627, retro_pabe_3699, retro_pabe_486, retro_pabe_532,
Pteropus vampyrus ENSPVAG00000002211 possible_ortholog 1 retrogene
retro_pvam_851,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogar_536 92.31 51.85
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2. retro_ogar_595 65.92 58.92
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3. retro_ogar_614 93.12 53.90
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4. retro_ogar_1554 64.29 60.68
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5. retro_ogar_1623 91.98 53.87
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6. retro_ogar_1671 86.67 61.02
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7. retro_ogar_1776 87.21 57.58
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8. retro_ogar_2015 65.18 74.75
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9. retro_ogar_2168 69.14 54.24
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10. retro_ogar_2207 96.25 53.54
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11. retro_ogar_2461 53.95 50.85
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12. retro_ogar_2605 74.16 58.64
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13. retro_ogar_2832 76.07 53.87
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14. retro_ogar_3037 86.79 52.86
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Download FASTA sequences of all ENSOGAG00000013616 retrocopies