Parental gene:

HNRNPAB, ENSOCUG00000026424

Aliases:None
Description:heterogeneous nuclear ribonucleoprotein A/B [Source:HGNC Symbol;Acc:5034]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:3:58295551..58300578(+)


>ENSOCUG00000026424
CAGAACGAGGAGGACGCGGGGAAAATGTTCGTTGGTGGTCTGAGCTGGGATACCAGCAAAAAAGATTTAAAGGACTATTT
TACTAAGTTTGGAGAGGTCGTTGACTGCACAATAAAAATGGATCCCAACACTGGACGGTCAAGAGGATTTGGGTTTATCC
TCTTCAAAGACGCAACCAGTGTGGAGAAGGAACAGGTCCTAGATCAGAAGGAGCACAGGCTGGATGGCCGTGTCATTGAC
CCTAAAAAGGCCATGGCTATGAAGAAGGACCCAGTGAAGAAGATCTTTGTGGGGGGTCTGAATCCTGAAGCTACTGAGGA
AAAGATCAGGGAGTACTTTGGCGAGTTTGGGGAGATTGAGGCCATTGAGCTTCCAATGGATCCAAAGTCGAACAAAAGAC
GGGGTTTTGTTTTTATCACCTTTAAAGAAGAAGACCCCGTGAAGAAGGTTCTGGAGAAAAAGTTCCATACCATCAGTGGA
AGCAAGTGTGAAATCAAGGTGGCCCAGCCCAAGGAGGTCTATCAGCAGCAGCAGTACGGCTCTGGGGGCCGCGGGAACCG
CAGCCGGGGGAGCCGAGGCAGTGGTGGCGGCGGTGGAGGTGGAGGTCAGAGTCAGAGTTGGAATCAGGGCTACGGCAACT
ACTGGAACCAGGGCTACGGCTACCAGCAGGGCTACGGGCCCGGCTTTGGCGGCTACGACTACTCGCCCTATGGCTATTAC
GGCTACGGCCCCGGCTACGACTACAGTCAGGGTAGTGCAAATTACGGGAAGAGCCAGCGACGTGGTGGCCACCAGAATAA
CTACAAGCCGTACTGA

Library Parental gene expression (RPM)
SRP017611_brain 151 .38 RPM
SRP017611_kidney 164 .81 RPM
SRP017611_liver 79 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000000241 ortholog_one2one 2 retrogenes
retro_cfam_408, retro_cfam_412,
Homo sapiens ENSG00000197451 ortholog_one2one 1 retrogene
retro_hsap_962,
Loxodonta africana ENSLAFG00000001189 ortholog_one2one 1 retrogene
retro_lafr_405,
Macropus eugenii ENSMEUG00000007909 ortholog_one2one 2 retrogenes
retro_meug_169, retro_meug_246,
Myotis lucifugus ENSMLUG00000003380 ortholog_one2one 2 retrogenes
retro_mluc_2024, retro_mluc_2138,
Nomascus leucogenys ENSNLEG00000015775 ortholog_one2one 1 retrogene
retro_nleu_1611,
Oryctolagus cuniculus ENSOCUG00000002743 other_paralog 2 retrogenes
retro_ocun_994, retro_ocun_995,
Oryctolagus cuniculus ENSOCUG00000013350 other_paralog 1 retrogene
retro_ocun_1675,
Oryctolagus cuniculus ENSOCUG00000013805 within_species_paralog 1 retrogene
retro_ocun_505,
Oryctolagus cuniculus ENSOCUG00000026859 within_species_paralog 2 retrogenes
retro_ocun_1205, retro_ocun_642,
Otolemur garnettii ENSOGAG00000030251 ortholog_one2one 2 retrogenes
retro_ogar_3509, retro_ogar_385,
Pongo abelii ENSPPYG00000016107 ortholog_one2one 1 retrogene
retro_pabe_821,
Pan troglodytes ENSPTRG00000017601 ortholog_one2one 1 retrogene
retro_ptro_666,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_950 57.97 74.54
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2. retro_ocun_1800 88.78 74.91
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3. retro_ocun_1811 84.88 74.91
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Download FASTA sequences of all ENSOCUG00000026424 retrocopies