Parental gene:

LAPTM4B, ENSOCUG00000013689

Aliases:None
Description:lysosomal protein transmembrane 4 beta [Source:HGNC Symbol;Acc:13646]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:3:113607695..113678952(+)


>ENSOCUG00000013689
ATGGTCGCGCCCTGGACGCGGTTCTACTCCAACAGCTGCTGCCTGTGCTGCCATGTCCGCACCGGTACCATCCTGCTCGG
CGTCTGGTACCTGATCATCAATGCCGTGGTCCTGCTGATTTTACTGAGCGCGCTGGCTGACCCCGACCAGTACCACTTCT
CGGGTTCTGAGCTAGGAGGCGACATCGAGTTCATGGATGATGCCAATATGTGCATTGCTATCGCAATTTCTCTTCTCATG
ATCCTGATATGTGCAATGGCCACTTACGGTGCATACAAGCAACACGCTGCCTGGCTCATCCCGTTCTTCTGTTACCAGAT
CTTCGATTTTGCCCTGAACACCTTGGTTGCAGTCACTGTGCTTGTCTATCCCAACTCCATTCAGGAATACATACGGCAGC
TGCCTCCTAATTTTCCCTACAGAGAGGATATCATGGCAGTGAACCCTACCTGTTTGGTTCTTATTATTCTTCTGTTTATC
AGCATTATCTTGACTTTCAAGGGTTACTTGATTAGCTGTGTTTGGAACTGCTACCGATACATCAACAGCAGGAATGCCTC
TGATGTCCTGGTTTATGTCACCAGCAATGACACTACGGTGCTGTTACCCCCGTACGACGATGCCGCTGTGAACGGCGCTG
CTAAGGAGCCGCCGCCACCTTACGTGTCTGCCTAG

Library Parental gene expression (RPM)
SRP017611_brain 57 .89 RPM
SRP017611_kidney 68 .82 RPM
SRP017611_liver 43 .01 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000016959 ortholog_one2one 3 retrogenes
retro_btau_1493, retro_btau_1759, retro_btau_786,
Callithrix jacchus ENSCJAG00000031235 possible_ortholog 3 retrogenes
retro_cjac_1368, retro_cjac_1664, retro_cjac_3027,
Myotis lucifugus ENSMLUG00000003618 ortholog_one2one 1 retrogene
retro_mluc_1182,
Mus musculus ENSMUSG00000022257 ortholog_one2one 1 retrogene
retro_mmus_1549,
Otolemur garnettii ENSOGAG00000000512 possible_ortholog 3 retrogenes
retro_ogar_1977, retro_ogar_2856, retro_ogar_2902,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_627 64.23 54.02
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Download FASTA sequences of all ENSOCUG00000013689 retrocopies