Parental gene:

DENR, ENSOCUG00000008150

Aliases:None
Description:density-regulated protein [Source:HGNC Symbol;Acc:2769]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:GL018824:39303..60799(-)


>ENSOCUG00000008150
ATGGCTTCTGACGTTTCCGAATGCAGCGGTGCTGACTGCAAGGGGGACCCTCGGAACAGTGCCAAGTTAGATGCGGGCTA
CCCACTCCGCGTGCTCTACTGTGGAGTGTGTTCATTACCAACAGAGTACTGTGAATATATGCCGGATGTTGCTAAATGCA
GACAGTGGTTAGAGAAGAATTTTCCAAATGAATTTGCAAAACTTACCGTAGAAAATTCACCCAAACAAGAGGCAGGAATC
ACTGAGGGTCAAGGAACAGCAGGGGAAGAAGAGGAGAAGAAAAAACAAAAGAGAGGTGGAAGAGGTCAAATAAAACAGAA
GAAAAAGACAGTACCACAAAAGGTTACAATAGCCAAAATTCCCAGAGCAAAGAAGAAATATGTGACAAGAGTATGTGGTC
TTGCAACTTTTGAAATTGACCTTAAGGAAGCACAAAGATTTTTTGCGCAGAAATTCTCCTGTGGTGCCTCAGTAACAGGG
GAGGACGAGATCATCATTCAGGGAGACTTCACAGATGACATCATTGACGTCATTCAGGAAAAGTGGCCGGAGGTGGATGA
TGACAGTATCGAAGATCTTGGAGAAGTGAAGAAGTGA

Library Parental gene expression (RPM)
SRP017611_brain 57 .89 RPM
SRP017611_kidney 41 .05 RPM
SRP017611_liver 20 .19 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000016012 ortholog_one2many 1 retrogene
retro_acar_71,
Bos taurus ENSBTAG00000032433 possible_ortholog 1 retrogene
retro_btau_110,
Callithrix jacchus ENSCJAG00000020488 ortholog_one2one 4 retrogenes
retro_cjac_1665, retro_cjac_2303, retro_cjac_2377, retro_cjac_2627,
Echinops telfairi ENSETEG00000013029 possible_ortholog 1 retrogene
retro_etel_1127,
Homo sapiens ENSG00000139726 ortholog_one2one 4 retrogenes
retro_hsap_1028, retro_hsap_1854, retro_hsap_2471, retro_hsap_4313,
Gorilla gorilla ENSGGOG00000005562 ortholog_one2one 3 retrogenes
retro_ggor_2156, retro_ggor_2883, retro_ggor_813,
Myotis lucifugus ENSMLUG00000002088 possible_ortholog 1 retrogene
retro_mluc_2450,
Nomascus leucogenys ENSNLEG00000002186 ortholog_one2one 3 retrogenes
retro_nleu_1465, retro_nleu_2136, retro_nleu_906,
Ochotona princeps ENSOPRG00000015974 ortholog_one2one 5 retrogenes
retro_opri_1000, retro_opri_1139, retro_opri_1147, retro_opri_133, retro_opri_183,
Pongo abelii ENSPPYG00000005073 ortholog_one2one 3 retrogenes
retro_pabe_1821, retro_pabe_3509, retro_pabe_861,
Pan troglodytes ENSPTRG00000005584 ortholog_one2one 4 retrogenes
retro_ptro_1236, retro_ptro_2921, retro_ptro_2955, retro_ptro_703,
Sorex araneus ENSSARG00000004446 possible_ortholog 4 retrogenes
retro_sara_118, retro_sara_125, retro_sara_523, retro_sara_722,
Sus scrofa ENSSSCG00000009788 possible_ortholog 1 retrogene
retro_sscr_1145,
Tursiops truncatus ENSTTRG00000015856 possible_ortholog 1 retrogene
retro_ttru_745,
Vicugna pacos ENSVPAG00000011472 possible_ortholog 1 retrogene
retro_vpac_139,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1325 74.77 55.05
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2. retro_ocun_1524 57.80 54.55
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Download FASTA sequences of all ENSOCUG00000008150 retrocopies