Parental gene: | DENR, ENSPTRG00000005584 |
| Aliases: | None |
| Description: | density-regulated protein [Source:HGNC Symbol;Acc:2769] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 12:123596400..123615456(+) |
>ENSPTRG00000005584
ATGGCTGCTGACATTTCTGAATCCAGCGGGGCTGACTGCAAAGGAGACCCAAGGAACAGTGCCAAGTTAGATGCCGATTA
CCCACTTCGAGTCCTTTATTGTGGAGTCTGTTCGTTACCAACAGAGTACTGTGAATATATGCCTGATGTTGCTAAATGTA
GACAATGGTTAGAGAAGAATTTTCCAAATGAATTTGCAAAACTTACTGTAGAAAATTCACCCAAACAAGAAGCTGGAATT
AGTGAGGGTCAAGGAACAGCAGGGGAAGAAGAGGAGAAGAAAAAACAGAAGAGAGGTGGAAGGGGTCAAATAAAACAAAA
AAAGAAGACCGTACCACAAAAGGTTACTATAGCCAAAATTCCCAGAGCAAAGAAGAAATATGTGACAAGAGTATGTGGCC
TTGCAACTTTTGAAATTGATCTTAAAGAAGCACAAAGATTTTTTGCTCAAAAGTTCTCCTGTGGTGCCTCAGTAACAGGG
GAGGATGAAATTATCATTCAGGGAGATTTTACAGATGACATAATTGATGTCATTCAGGAAAAATGGCCAGAGGTAGATGA
TGACAGCATCGAAGATCTTGGAGAAGTAAAGAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 15 .60 RPM |
| SRP007412_cerebellum | 21 .22 RPM |
| SRP007412_heart | 21 .42 RPM |
| SRP007412_kidney | 20 .14 RPM |
| SRP007412_liver | 17 .55 RPM |
| SRP007412_testis | 20 .34 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000016012 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000032433 | possible_ortholog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000020488 | ortholog_one2one | 4 retrogenes | |
| Homo sapiens | ENSG00000139726 | ortholog_one2one | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000005562 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000002186 | ortholog_one2one | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000008150 | ortholog_one2one | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000015974 | ortholog_one2one | 5 retrogenes | |
| Pongo abelii | ENSPPYG00000005073 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_703 | 87.88 | 98.48 | Please wait, loading  |
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| 2. | retro_ptro_1236 | 80.88 | 67.68 | Please wait, loading |
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| 3. | retro_ptro_2921 | 78.29 | 63.64 | Please wait, loading |
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| 4. | retro_ptro_2955 | 80.88 | 67.68 | Please wait, loading |
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Download FASTA sequences of all ENSPTRG00000005584 retrocopies