Parental gene: | COPS8, ENSOCUG00000007341 |
| Aliases: | None |
| Description: | COP9 signalosome subunit 8 [Source:HGNC Symbol;Acc:24335] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | GL018840:190108..202804(+) |
>ENSOCUG00000007341
ATGCCAGTGGCGGTGATGGCAGAAAGCGCCTTCAGCTTCAAAAAGCTACTGGATCAGTGCGAGAACCAGGAGCTCGAGGC
TCCTGGAGGAATCGCGACGCCCCCGGTGTACGGCCAGCTGCTGGCTTTGTATCTGCTGCATAACGACATGAATAACGCGA
GATACCTCTGGAAGAGAATACCGCCTGCCATAAAGTCCGCGAACTCTGAGCTCGGGGGGATCTGGTCGGTGGGACAGAGG
ATCTGGCAGAGGGACTTCCCCGGGATCTACACGACCATCAGCGCTCACCAGTGGTCCGAGACGGTGCAGCCCATCATGGA
GGCACTGAGAGACGCAACAAGGAGGCGAGCCTTCGCCCTGGTCTCCCAGGCGTACACCTCGATAATCGCGGACGACTTCG
CCGCCTTCGTGGGGCTTCCCGTGGAAGAGGCCGTGAAAGGTATCTTGGAGCAAGGATGGCAAGCTGACTCCACCACGAGG
ATGGTGTTGCCCAGGAAGCCAGTTGCAGGAGCCCCAGATGTTTCCTTTAACAGATTTATTCCCTTATCAGAGCCCGCCCC
AGTGCCTCCGATTCCTAACGAGCAGCAGCTAGCCAGACTGACCGATTATGTGGCTTTCCTGGAGAACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 18 .71 RPM |
| SRP017611_kidney | 11 .66 RPM |
| SRP017611_liver | 7 .25 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000005854 | ortholog_one2one | 3 retrogenes | |
| Canis familiaris | ENSCAFG00000030168 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000002267 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000015309 | ortholog_one2many | 5 retrogenes | |
| Felis catus | ENSFCAG00000013789 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000198612 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000008617 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000008189 | ortholog_one2many | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000021605 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000007474 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000000068 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000034432 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000010706 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000013308 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000019635 | ortholog_one2one | 3 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000022662 | ortholog_one2one | 4 retrogenes | |
| Tupaia belangeri | ENSTBEG00000015944 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000002196 | ortholog_one2one | 7 retrogenes | |
| Tursiops truncatus | ENSTTRG00000013614 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_428 | 72.03 | 67.94 | Please wait, loading  |
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| 2. | retro_ocun_550 | 77.62 | 100.00 | Please wait, loading |
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| 3. | retro_ocun_1549 | 99.05 | 100.00 | Please wait, loading |
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| 4. | retro_ocun_1579 | 73.36 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSOCUG00000007341 retrocopies