Parental gene:

PGAM1, ENSNLEG00000013804

Aliases:None
Description:None
Organism:Gibbon (Nomascus leucogenys)
Coordinates:GL397265.1:30960869..30968301(+)


>ENSNLEG00000013804
ATGGCAGCCTACAAACTGGTGCTGATCCGGCACGGCGAGAGCGCATGGAACCTGGAGAACCGCTTCAGCGGCTGGTACGA
CGCCGACCTGAGCCCGGCGGGCCACGAGGAGGCGAAGCGCGGCGGGCAGGCGCTACGAGATGCTGGCTATGAGTTTGACA
TCTGCTTCACCTCAGTGCAGAAGAGAGCGATCCGGACGCTCTGGACTGTGCTAGATGCCATTGATCAGATGTGGCTGCCA
GTGGTGAGGACTTGGCGCCTCAATGAGCGGCACTATGGTGGTCTAACCGGTCTCAATAAAGCAGAAACTGCTGCAAAGCA
TGGTGAGGCCCAGGTGAAGATCTGGAGGCGCTCCTATGATGTCCCACCACCTCCGATGGAGCCCGACCATCCTTTCTACA
GCAATATCAGTAAGGATCGCAGGTATGCAGACCTCACAGAAGATCAGCTACCCTCCTGCGAGAGTCTGAAGGATACTATT
GCCAGAGCTCTGCCCTTCTGGAATGAAGAAATAGTTCCCCAGATCAAGGAGGGGAAACGTGTACTGATTGCAGCCCATGG
CAACAGCCTCCGGGGCATTGTCAAGCATCTGGAGGGTCTCTCTGAAGAGGCTATCATGGAGCTGAACCTGCCGACTGGTA
TTCCCATTGTCTATGAATTGGACAAGAACTTGAAGCCTATCAAGTCCATGCAGTTTCTGGGGGATGAAGAGACGGTGCGC
AAAGCCATGGAAGCTGTGGCTGCCCAGGGCAAGGCCAAGAAGTGA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000012697 ortholog_one2one 2 retrogenes
retro_btau_1611, retro_btau_472,
Canis familiaris ENSCAFG00000009062 ortholog_one2one 1 retrogene
retro_cfam_1297,
Callithrix jacchus ENSCJAG00000016575 possible_ortholog 1 retrogene
retro_cjac_370,
Echinops telfairi ENSETEG00000002467 possible_ortholog 1 retrogene
retro_etel_1595,
Homo sapiens ENSG00000171314 possible_ortholog 12 retrogenes
retro_hsap_1048, retro_hsap_1052, retro_hsap_1142, retro_hsap_2235, retro_hsap_2604, retro_hsap_3083, retro_hsap_3488, retro_hsap_4249, retro_hsap_4686, retro_hsap_4821, retro_hsap_885, retro_hsap_913,
Gorilla gorilla ENSGGOG00000028602 possible_ortholog 13 retrogenes
retro_ggor_1220, retro_ggor_1500, retro_ggor_1667, retro_ggor_1824, retro_ggor_2061, retro_ggor_2118, retro_ggor_2353, retro_ggor_2849, retro_ggor_3005, retro_ggor_3034, retro_ggor_716, retro_ggor_738, retro_ggor_827,
Loxodonta africana ENSLAFG00000015979 ortholog_one2one 1 retrogene
retro_lafr_886,
Macaca mulatta ENSMMUG00000020027 possible_ortholog 1 retrogene
retro_mmul_119,
Monodelphis domestica ENSMODG00000004242 possible_ortholog 4 retrogenes
retro_mdom_1342, retro_mdom_1893, retro_mdom_610, retro_mdom_668,
Rattus norvegicus ENSRNOG00000050585 possible_ortholog 7 retrogenes
retro_rnor_1669, retro_rnor_2241, retro_rnor_2275, retro_rnor_2361, retro_rnor_2568, retro_rnor_691, retro_rnor_703,
Drosophila melanogaster FBgn0014869 ortholog_many2many 1 retrogene
retro_dmel_57,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_nleu_280 77.50 78.35
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2. retro_nleu_1367 77.08 56.30
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3. retro_nleu_1535 88.02 65.75
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4. retro_nleu_1658 72.41 67.72
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5. retro_nleu_2012 60.62 61.81
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6. retro_nleu_2139 74.07 52.76
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7. retro_nleu_2196 75.86 57.09
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8. retro_nleu_2205 85.10 100.00
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9. retro_nleu_2488 93.15 57.48
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10. retro_nleu_2667 76.34 87.80
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Download FASTA sequences of all ENSNLEG00000013804 retrocopies