Parental gene:

Dppa5a, ENSMUSG00000060461

Aliases:Dppa5a, AA536857, Dppa5, Esg1, ecat2
Description:developmental pluripotency associated 5A [Source:MGI Symbol;Acc:MGI:101800]
Organism:Mouse (Mus musculus)
Coordinates:9:78367051..78368177(-)


>ENSMUSG00000060461
ATGATGGTGACCCTCGTGACCCGTAAAGATATCCCCCCGTGGGTGAAAGTTCCTGAAGACCTGAAAGATCCAGAAGTATT
CCAGGTCCAGTCGCTGGTGCTGAAATATCTGTTTGGCCCACAGGGATCTCGAATGTCTCACATCGAGCAGGTGAGCCAGG
CCATGTTTGAGCTGAAGAACCTGGAATCTCCCGAAGAACTTATCGAGGTCTTCATTTACGGCTCTCAAAACAACAAGATT
CGGGCTAAATGGATGCTTCAGTCCATGGCTGAGAGGTACCACCTGCGCCAGCAAAAAGGAGTGCTGAAGCTGGAGGAATC
CATGAAGACCCTGGAGCTAGGCCAGTGTATCGAGTGA

Library Parental gene expression (RPM)
SRP007412_brain 0 .02 RPM
SRP007412_cerebellum 0 .04 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .02 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .09 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000002647 ortholog_one2many 2 retrogenes
retro_cfam_1216, retro_cfam_524,
Choloepus hoffmanni ENSCHOG00000012338 ortholog_one2many 1 retrogene
retro_chof_2495,
Callithrix jacchus ENSCJAG00000009945 ortholog_many2many 3 retrogenes
retro_cjac_1978, retro_cjac_62, retro_cjac_85,
Dasypus novemcinctus ENSDNOG00000011544 ortholog_many2many 4 retrogenes
retro_dnov_115, retro_dnov_15, retro_dnov_2318, retro_dnov_53,
Dipodomys ordii ENSDORG00000000378 ortholog_one2many 2 retrogenes
retro_dord_324, retro_dord_690,
Homo sapiens ENSG00000203909 ortholog_one2many 1 retrogene
retro_hsap_2067,
Gorilla gorilla ENSGGOG00000012001 ortholog_one2many 1 retrogene
retro_ggor_1489,
Myotis lucifugus ENSMLUG00000004463 ortholog_one2many 1 retrogene
retro_mluc_1051,
Macaca mulatta ENSMMUG00000000417 ortholog_one2many 1 retrogene
retro_mmul_1409,
Pongo abelii ENSPPYG00000016771 ortholog_one2many 1 retrogene
retro_pabe_1680,
Pan troglodytes ENSPTRG00000029547 ortholog_one2many 1 retrogene
retro_ptro_1380,
Rattus norvegicus ENSRNOG00000000199 ortholog_many2many 3 retrogenes
retro_rnor_106, retro_rnor_28, retro_rnor_76,
Sus scrofa ENSSSCG00000004283 ortholog_one2many 2 retrogenes
retro_sscr_190, retro_sscr_487,
Ictidomys tridecemlineatus ENSSTOG00000005326 ortholog_one2many 2 retrogenes
retro_itri_199, retro_itri_703,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_58 84.48 98.31
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2. retro_mmus_127 85.98 90.68
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3. retro_mmus_1280 74.29 88.98
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4. retro_mmus_1537 92.38 88.98
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5. retro_mmus_1666 89.08 100.00
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6. retro_mmus_2557 94.07 100.00
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7. retro_mmus_3415 94.12 100.00
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Download FASTA sequences of all ENSMUSG00000060461 retrocopies