Parental gene:

Chmp3, ENSMUSG00000053119

Aliases:Chmp3, 25.1, 4921505F14Rik, 9130011K15Rik, CGI-49, D6Ertd286e, NEDF, Vps24
Description:charged multivesicular body protein 3 [Source:MGI Symbol;Acc:MGI:1913950]
Organism:Mouse (Mus musculus)
Coordinates:6:71543796..71582609(+)


>ENSMUSG00000053119
ATGGGACTCTTTGGAAAAACCCAGGAGAAGCCTCCCAAAGAGCTGGTTAATGAATGGTCACTGAAGATCAGAAAGGAAAT
GAGAGTTGTTGACAGGCAAATAAGAGATATCCAAAGAGAAGAAGAGAAAGTAAAACGGTCTGTGAAAGATGCAGCCAAGA
AGGGCCAAAAGGAAGTCTGTGTGGTTCTGGCCAAGGAGATGATCAGGTCAAGGAAAGCCGTGAGCAAGCTCTATGCCTCC
AAAGCACACATGAACTCTGTGCTCATGGGCATGAAGAACCAACTCGCGGTCCTGCGAGTAGCTGGTTCTCTGCAGAAGAG
CACAGAAGTGATGAAGGCAATGCAGAGTCTTGTGAAGATCCCAGAAATCCAGGCCACCATGCGGGAGCTGTCCAAAGAGA
TGATGAAGGCTGGAATCATAGAGGAGATGTTAGAGGATACATTTGAAAGCATGGATGATCAAGAAGAAATGGAAGAAGCA
GCTGAGATGGAGATTGACAGAATCCTCTTTGAAATCACAGCAGGAGCCTTGGGCAAAGCACCCAGTAAAGTAACCGATGC
CCTTCCTGAGCCTGAACCCGCAGGAGCGATGGCTGCCTCCGAAGAGGGAGAAGAGGAAGAAGATGAAGAGGACCTGGAGG
CTATGCAGTCACGGCTGGCCACACTCAGAAGCTAG

Library Parental gene expression (RPM)
SRP007412_brain 84 .41 RPM
SRP007412_cerebellum 76 .60 RPM
SRP007412_heart 56 .59 RPM
SRP007412_kidney 89 .74 RPM
SRP007412_liver 57 .68 RPM
SRP007412_testis 42 .67 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000007479 ortholog_one2one 1 retrogene
retro_cfam_1869,
Callithrix jacchus ENSCJAG00000019406 ortholog_one2one 2 retrogenes
retro_cjac_2032, retro_cjac_2784,
Cavia porcellus ENSCPOG00000001723 ortholog_one2one 1 retrogene
retro_cpor_920,
Dipodomys ordii ENSDORG00000002851 ortholog_one2one 1 retrogene
retro_dord_382,
Macropus eugenii ENSMEUG00000009111 ortholog_one2one 1 retrogene
retro_meug_178,
Microcebus murinus ENSMICG00000005492 ortholog_one2many 3 retrogenes
retro_mmur_1110, retro_mmur_1396, retro_mmur_47,
Macaca mulatta ENSMMUG00000013134 ortholog_one2one 1 retrogene
retro_mmul_1797,
Mustela putorius furo ENSMPUG00000009273 ortholog_one2one 1 retrogene
retro_mputfur_1508,
Oryctolagus cuniculus ENSOCUG00000029277 ortholog_one2one 1 retrogene
retro_ocun_1044,
Ochotona princeps ENSOPRG00000002191 ortholog_one2many 2 retrogenes
retro_opri_18, retro_opri_436,
Sorex araneus ENSSARG00000008917 ortholog_one2many 1 retrogene
retro_sara_13,
Tarsius syrichta ENSTSYG00000014743 ortholog_one2one 1 retrogene
retro_tsyr_561,
Tursiops truncatus ENSTTRG00000010400 ortholog_one2one 1 retrogene
retro_ttru_638,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_1683 94.41 63.84
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Download FASTA sequences of all ENSMUSG00000053119 retrocopies