Parental gene:

CHMP3, ENSCPOG00000001723

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_37:4331118..4358205(+)


>ENSCPOG00000001723
ATGGGGCTGTTTGGAAAAACCCAGGAGAAGCCGCCCAAAGAGATGGTCAATGAATGGTCATTGAAGATAAGAAAAGAAAT
GAGAGTCGTTGACAGACAAATAAGAGATATCCAGAGAGAAGAAGAGAAAGTGAAACGGTCTGTGAAAGATGCTGCCAAGA
AGGGCCAGAAGGATGTCTGCGTGATTCTGGCCAAGGAGGTGGTCAGGTCGAGGAAGGCCGTGAGCAAGCTGTACGCATCC
AAGGCACACATGAACTCCGTGCTCATGGGGATGAAGAACCAGCTTGCGGTCCTGCGAGTGGCCGGGTCCCTGCAGAAGAG
CACTGAAGTAATGAAGGCCATGCAGAGTCTCGTGAAGATCCCAGAAATCCAGGCCACCATGCGGGAGCTGTCCAAGGAGA
TGATGAAGGCTGGGATCATAGAAGAGATGCTGGAGGACACTTTTGAAAGCATGGACGATCAAGAAGAAATGGAAGAAGAG
GCTGAGATGGAAATTGACAAAATCCTCTTTGAAATTACAGCGGGAGCCTTGGGCAAAGCACCCAGTAAAGTGACCGATGC
CCTTCCAGAGCCTGAACCTTCGGGAGCAATGGCTGCCTCTGAGGATGAAGAGGAAGAGGAGGCCCTGGAGGCCATGCAGT
CCCGGCTGGCCACACTCCGCAGCTAG

Library Parental gene expression (RPM)
SRP017611_brain 40 .89 RPM
SRP017611_kidney 56 .22 RPM
SRP017611_liver 23 .98 RPM
SRP040447_lung 63 .53 RPM
SRP040447_skeletal_muscle 42 .95 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000007479 ortholog_one2one 1 retrogene
retro_cfam_1869,
Callithrix jacchus ENSCJAG00000019406 ortholog_one2one 2 retrogenes
retro_cjac_2032, retro_cjac_2784,
Macropus eugenii ENSMEUG00000009111 ortholog_one2one 1 retrogene
retro_meug_178,
Microcebus murinus ENSMICG00000005492 possible_ortholog 3 retrogenes
retro_mmur_1110, retro_mmur_1396, retro_mmur_47,
Mus musculus ENSMUSG00000053119 ortholog_one2one 1 retrogene
retro_mmus_1683,
Oryctolagus cuniculus ENSOCUG00000029277 ortholog_one2one 1 retrogene
retro_ocun_1044,
Ochotona princeps ENSOPRG00000002191 ortholog_one2one 2 retrogenes
retro_opri_18, retro_opri_436,
Sorex araneus ENSSARG00000008917 possible_ortholog 1 retrogene
retro_sara_13,
Tursiops truncatus ENSTTRG00000010400 ortholog_one2one 1 retrogene
retro_ttru_638,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_920 52.99 52.04
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Download FASTA sequences of all ENSCPOG00000001723 retrocopies