Parental gene:

Rbm7, ENSMUSG00000042396

Aliases:Rbm7, 1200007M24Rik, 1500011D06Rik, AU041934, AW554393
Description:RNA binding motif protein 7 [Source:MGI Symbol;Acc:MGI:1914260]
Organism:Mouse (Mus musculus)
Coordinates:9:48488708..48495330(-)


>ENSMUSG00000042396
ATGGGGGCGGCGGCCGCAGAGGCCGACCGCACTCTGTTCGTGGGTAACCTGGAGACGAAGGTGACAGAGGAGCTCCTCTT
CGAGCTGTTCCACCAGGCTGGGCCGGTAATAAAAGTGAAAATCCCGAAAGATAAAGATGGCAAACTGAAGCAGTTTGCAT
TCGTGAACTTCAAACATGAAGTGTCTGTTCCCTATGCCATGAATCTGCTCAACGGAATCAAACTTTTCGGGAGGCCTATC
AAAATTCAGTTTAGATCAGGAAGCAGTCACGCCTCTCAGGATGCCAGTGTGTCATATCCCCAGCATCATGTTGGAAATTT
AAGCCCAACCTCCACATCTCCTAACAGCTATGAAAGGACAGTGGGTAACGTGTCTCCGACAGCTCAGATGGTCCAGAGGT
CCTTTTCTTCTCCAGAAGATTATCAGCGGCAAGCAGTGATGAACAGTGTTTTCAGACAGATGTCATATGCTGGGAAATTT
GGTTCTCCACATGCGGATCAGTTGGGATTTTCACCATCAGCTCAACCACATGGCCATACCTTTAACCAGTCTTCCAGCTC
CCAGTGGCGCCAAGATGCACTGTCATCACAGCGTAAAAGACAGAATTCTCACCCCTACCTAGCAGATAGACACTATAGCC
GTGAGCAGCGCTACTCTGACCATGGGTCTGACTATCATTACAGAGGCAGCCGAGAGGATTTCTACTATGACGACAGGAAT
CATGATGGCTGGAGCCATGACTATGATAACAGAAGGGACAGTAGTAGAGGTGGGAAGTGGCCCTCATCCAGACACTAA

Library Parental gene expression (RPM)
SRP007412_brain 18 .76 RPM
SRP007412_cerebellum 17 .28 RPM
SRP007412_heart 12 .20 RPM
SRP007412_kidney 24 .83 RPM
SRP007412_liver 31 .40 RPM
SRP007412_testis 47 .16 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000013514 ortholog_one2one 1 retrogene
retro_cfam_1021,
Choloepus hoffmanni ENSCHOG00000012747 ortholog_one2one 1 retrogene
retro_chof_570,
Homo sapiens ENSG00000076053 ortholog_one2many 1 retrogene
retro_hsap_2283,
Gorilla gorilla ENSGGOG00000009941 ortholog_one2one 1 retrogene
retro_ggor_1696,
Loxodonta africana ENSLAFG00000012444 ortholog_one2one 1 retrogene
retro_lafr_892,
Myotis lucifugus ENSMLUG00000023234 ortholog_one2one 2 retrogenes
retro_mluc_1555, retro_mluc_587,
Monodelphis domestica ENSMODG00000013918 ortholog_one2one 1 retrogene
retro_mdom_535,
Mus musculus ENSMUSG00000068856 within_species_paralog 1 retrogene
retro_mmus_1406,
Nomascus leucogenys ENSNLEG00000007323 ortholog_one2one 1 retrogene
retro_nleu_409,
Oryctolagus cuniculus ENSOCUG00000003342 ortholog_one2one 1 retrogene
retro_ocun_924,
Otolemur garnettii ENSOGAG00000016857 ortholog_one2one 1 retrogene
retro_ogar_3103,
Pongo abelii ENSPPYG00000003894 ortholog_one2one 1 retrogene
retro_pabe_1669,
Pan troglodytes ENSPTRG00000004305 ortholog_one2one 1 retrogene
retro_ptro_1617,
Ictidomys tridecemlineatus ENSSTOG00000012459 ortholog_one2one 1 retrogene
retro_itri_889,
Tursiops truncatus ENSTTRG00000001515 ortholog_one2one 3 retrogenes
retro_ttru_1316, retro_ttru_1441, retro_ttru_478,
Vicugna pacos ENSVPAG00000006300 ortholog_one2one 1 retrogene
retro_vpac_311,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_2436 52.56 56.98
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Download FASTA sequences of all ENSMUSG00000042396 retrocopies