Parental gene:

Mrpl47, ENSMUSG00000037531

Aliases:None
Description:mitochondrial ribosomal protein L47 [Source:MGI Symbol;Acc:MGI:1921850]
Organism:Mouse (Mus musculus)
Coordinates:3:32725396..32737147(-)


>ENSMUSG00000037531
ATGGCTGCGACCAGTCTAGTGGGTATTTGTAGAAGAGCCTCAGCGTTCCTGAAGGCAGCTTGTTCCCTAGTAAATCCCAA
GGACGCTGCTCACTCGGGTTGCAGGTCTTCTCTTAGTTTGTTACATAAGAACACACCACATGTCACATCTTTTCTCCAGT
GTAAATTACTTCATACCACGTTGTCAAGGAAAGGACTGGAAGAATTTTTTGATGACCCAAAGAATTGGGGGGAAGAAAAA
GTCAAATCTGGAGCTTCATGGACCTGCCAGCAGCTGAGGAACAAAAGTAACGAAGACTTACATAAGCTTTGGTATGTCCT
TCTGAAGGAAAGAAACATGCTTCTAACTCTGGAGCAGGAGGCCAAGCGACAGAGGTTGCCAATGCCAAGTCCGGAGCGCT
TAGAAAAGGTCGTTGATTCCATGGATAACGTAGATAAAGTTGTCCAGGAGAGGGAAGATGCTCTAAGGCTTCTTCAGACC
GGTCAAGAAAAGCCCAGACCCGGTGCTTGGAGAAGGGACATCTTTGGACGAATTGTCTGGCACAAATTCAAGCAGTGGCC
TATACCTTGGTACCTAAATAAAAGATACAACAGGAGGCGGTTCTTCGCAATGCCTTATGTGGATCGCTTTATCAGACTAA
GAATTGAGAAACACGCCCGCATTGAAGCAAGAAAGAGAAGTTTACAGAAAAAGAAAGAAAAAATTCTCCATGCAAAGTTC
CCACATCTCTCTCAAGAACGGAAATCAAGTAGTGTCTAA

Library Parental gene expression (RPM)
SRP007412_brain 11 .89 RPM
SRP007412_cerebellum 11 .16 RPM
SRP007412_heart 16 .41 RPM
SRP007412_kidney 12 .24 RPM
SRP007412_liver 8 .93 RPM
SRP007412_testis 30 .46 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000011380 ortholog_one2one 1 retrogene
retro_cfam_1085,
Cavia porcellus ENSCPOG00000002312 ortholog_one2one 2 retrogenes
retro_cpor_1219, retro_cpor_885,
Felis catus ENSFCAG00000031548 ortholog_one2one 1 retrogene
retro_fcat_235,
Macropus eugenii ENSMEUG00000012649 ortholog_one2one 2 retrogenes
retro_meug_1039, retro_meug_146,
Monodelphis domestica ENSMODG00000021301 ortholog_one2one 3 retrogenes
retro_mdom_1361, retro_mdom_1879, retro_mdom_562,
Mustela putorius furo ENSMPUG00000017214 ortholog_one2one 1 retrogene
retro_mputfur_495,
Otolemur garnettii ENSOGAG00000016957 ortholog_one2one 2 retrogenes
retro_ogar_1900, retro_ogar_3015,
Pteropus vampyrus ENSPVAG00000004284 ortholog_one2one 1 retrogene
retro_pvam_150,
Rattus norvegicus ENSRNOG00000011639 ortholog_one2one 2 retrogenes
retro_rnor_1829, retro_rnor_2523,
Sorex araneus ENSSARG00000006898 ortholog_one2one 2 retrogenes
retro_sara_269, retro_sara_721,
Tursiops truncatus ENSTTRG00000008909 ortholog_one2one 1 retrogene
retro_ttru_420,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_1976 76.54 69.05
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2. retro_mmus_1986 82.63 100.00
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3. retro_mmus_2753 80.71 100.00
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Download FASTA sequences of all ENSMUSG00000037531 retrocopies