Parental gene:

MRPL47, ENSCAFG00000011380

Aliases:None
Description:mitochondrial ribosomal protein L47 [Source:HGNC Symbol;Acc:16652]
Organism:Dog (Canis familiaris)
Coordinates:34:12988784..13020145(-)


>ENSCAFG00000011380
ATGGCTGCGGCCAGCGTCGGCGTTCTTTGGAGAAAGGTCTTAACCGGCTTGAAGGCTCCCAAGTTGCTTAAAAGTTCTCA
GGCCCTAGCTAGCACAGGTTGCAGGTTTTCACTTAGTCTTTTGCCTAAGAATATACCAAATGTCACATCTTTTCACCAGT
GTAGATTACTTCATACCACATTGTCAAGGAAAGGACTGGAAGAATTTTTTGATGACCCAAAGAACTGGGGGGAAGAAAAA
GTGAAATCTGGAGCTTCATGGACGTGTCAGCAATTAAGGAATAAAAGTAATGAAGATTTACATAAACTTTGGTATGTCCT
ACTGAAAGAAAGAAACATGCTCCTAACTCTAGAGCAGGAGGCCAAGCGGCAGAGATTGCCAATGCCAAGTCCGGAGCGGT
TAGAAAAGGTAATAGATTCCATGGATGCATTAGATAAAGTTGTCCAGGAAAGAGAAGATGCCCTAAGACTTCTTCAGACT
GGTCAAGAAAAAGCTAGACCTGGTGCTTGGAGAAGAGACATCTTTGGAAGAATCATCTGGCACAAATTCAAGCAGTGGCC
TATACCTTGGTACCTAAATAAAAGATACAATAGGAAACGATTCTTTGCAATGCCCTATGTGGAACGTTTTGTCAGACTGA
GACTTGAGAAACATGCCCGCATTGAAGCAAGAAAGAAAAGTTTAGAGAAAAAGAAAGAAAAATTTCTTCAGGAAAAGTTT
CCACATCTTTCTGAAGCCCAGAAGTCAAGTCAAGTCTAA

Library Parental gene expression (RPM)
SRP012049_cerebellum 9 .20 RPM
SRP017611_brain 11 .27 RPM
SRP017611_kidney 21 .33 RPM
SRP017611_liver 7 .18 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000002312 ortholog_one2one 2 retrogenes
retro_cpor_1219, retro_cpor_885,
Felis catus ENSFCAG00000031548 ortholog_one2one 1 retrogene
retro_fcat_235,
Macropus eugenii ENSMEUG00000012649 ortholog_one2one 2 retrogenes
retro_meug_1039, retro_meug_146,
Monodelphis domestica ENSMODG00000021301 ortholog_one2one 3 retrogenes
retro_mdom_1361, retro_mdom_1879, retro_mdom_562,
Mustela putorius furo ENSMPUG00000017214 ortholog_one2one 1 retrogene
retro_mputfur_495,
Mus musculus ENSMUSG00000037531 ortholog_one2one 3 retrogenes
retro_mmus_1976, retro_mmus_1986, retro_mmus_2753,
Otolemur garnettii ENSOGAG00000016957 ortholog_one2one 2 retrogenes
retro_ogar_1900, retro_ogar_3015,
Pteropus vampyrus ENSPVAG00000004284 ortholog_one2one 1 retrogene
retro_pvam_150,
Rattus norvegicus ENSRNOG00000011639 ortholog_one2one 2 retrogenes
retro_rnor_1829, retro_rnor_2523,
Sorex araneus ENSSARG00000006898 ortholog_one2one 2 retrogenes
retro_sara_269, retro_sara_721,
Tursiops truncatus ENSTTRG00000008909 ortholog_one2one 1 retrogene
retro_ttru_420,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1085 71.43 54.76
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Download FASTA sequences of all ENSCAFG00000011380 retrocopies