Parental gene:

1810013L24Rik, ENSMUSG00000022507

Aliases:1810013L24Rik, 1110017P05Rik, 3010002C02Rik, AA792997, AW124177, Gm19906, R74903
Description:RIKEN cDNA 1810013L24 gene [Source:MGI Symbol;Acc:MGI:1916303]
Organism:Mouse (Mus musculus)
Coordinates:16:8830099..8858916(+)


>ENSMUSG00000022507
ATGGAGGAGCGGAAGGAGGAGGGCGAGGCGGAGATCCAGGAGCACGGGCCGGAGCATTGGTTCTCCAAGTGGGAGCGGCA
GTGCCTGGCCGAGGCCGAGCAGGACGAGCAGTTGTCTCCCGAGCTGCAGGAGGAGGCGGCGGCCGCCGCGCAGCCCGAGC
ACAAGCAACAGAAGCTGTGGCATCTCTTCCAGAACTCGGCCACGGCCGTGGCTCAGCTCTACAAAGACCGAGTGTGTCAG
CAGCCAGGACTTTCTCTCTGGGTCCCCTTCCAAAACGCAGCCACCGCCGTCACCAACCTCTATAAAGAAAGTGTGGATAC
CCATCAGCGAAGTTTTGATATTGGAATTCAGATTGGCTATCAGCGACGCAATAAGGATGTGCTGGCCTGGGTAAAAAAGC
GCAGAAGAACTATTCGTAGAGAAGATTTGATCAGCTTCCTGTGTGGAAAGGTTCCTCCACCACGAAACTCTAGAGCTCCC
CCAAGACTGACTGTAGTGTCCCCTAACCGAGCTACTTCAACGGAAACTAGCTCATCTGTAGAGACTGATTTGCAACCCTT
CCGGGAAGCCATAGCTCTGCATGGTCTTAGTGGTGCAATGGCTAGTATAAGCGTGCGTTCGAGTACCCCAGGCTCTCCTA
CACATGTAAGCAGTGGACCGAATGCTAGTCGAAGGAGAAATGGACTCCATGATGTCGATTTGAACACTTTCATAACAGAA
GAAATGGCACTCCACTTGGACAATGGTGGAACTAGAAAGCGTACCTCAGCCCAGTGTGGCGATGTCATTACAGACTCACC
AACCCATAAACGCAACAGAATGCTCTAA

Library Parental gene expression (RPM)
SRP007412_brain 47 .57 RPM
SRP007412_cerebellum 41 .55 RPM
SRP007412_heart 49 .09 RPM
SRP007412_kidney 54 .61 RPM
SRP007412_liver 35 .01 RPM
SRP007412_testis 102 .96 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000010719 ortholog_one2one 2 retrogenes
retro_amel_1715, retro_amel_88,
Canis familiaris ENSCAFG00000018981 ortholog_one2one 1 retrogene
retro_cfam_147,
Cavia porcellus ENSCPOG00000010925 ortholog_one2one 1 retrogene
retro_cpor_101,
Dasypus novemcinctus ENSDNOG00000015893 ortholog_one2many 3 retrogenes
retro_dnov_1575, retro_dnov_2266, retro_dnov_827,
Equus caballus ENSECAG00000009430 ortholog_one2one 1 retrogene
retro_ecab_1091,
Homo sapiens ENSG00000182831 ortholog_one2one 1 retrogene
retro_hsap_4765,
Gorilla gorilla ENSGGOG00000010744 ortholog_one2one 1 retrogene
retro_ggor_2968,
Monodelphis domestica ENSMODG00000005378 ortholog_one2one 2 retrogenes
retro_mdom_1716, retro_mdom_299,
Mustela putorius furo ENSMPUG00000014707 ortholog_one2one 1 retrogene
retro_mputfur_44,
Nomascus leucogenys ENSNLEG00000010106 ortholog_one2one 1 retrogene
retro_nleu_2348,
Otolemur garnettii ENSOGAG00000003909 ortholog_one2one 1 retrogene
retro_ogar_74,
Pongo abelii ENSPPYG00000007088 ortholog_one2one 1 retrogene
retro_pabe_163,
Pan troglodytes ENSPTRG00000007751 ortholog_one2one 1 retrogene
retro_ptro_3172,
Rattus norvegicus ENSRNOG00000002545 ortholog_one2one 2 retrogenes
retro_rnor_156, retro_rnor_1928,
Sus scrofa ENSSSCG00000028454 ortholog_one2many 1 retrogene
retro_sscr_1177,
Ictidomys tridecemlineatus ENSSTOG00000009324 ortholog_one2one 1 retrogene
retro_itri_137,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_3460 68.87 54.55
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Download FASTA sequences of all ENSMUSG00000022507 retrocopies