Parental gene:

ENSDNOG00000015893

Aliases:None
Description:None
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_6310:16482..81270(+)


>ENSDNOG00000015893
AGGGAGGCGCGGCGGGAGGAGGGCGAGGCCGAGGTCCGGGAGCACCCCGAGCACTGGTTCTCCGAGTGGCAGCGCCTGGC
CGAGGCCGCGCAGGCCGAGCAGCTGCCCGAGCTGCAGGAGGCGGCGGCCGCGCAGCCCGAGCACAAGCCGCGGGAGCTGC
GGCGCCTCTGCCAGAACCCGGCCACCGCCGCGGCCCGGCTCCACAAAGACCGAGTGTGTCAGCAGCCAGGACTTTCTCTC
TGGGTCCCCTTCCAAAATGCAGCCACCGCCGTCACCAATCTCTACAAAGAAAGTGTGGATACCCATCAGCGAAGTTTTGA
TATTGGAATTCAGATTGGCTATCAGCGTCGCAATAAGGATGTGTTGGCTTGGGTTAAACGCAGAAGAACTATACGGAGAG
AAGACTTGATCAGCTTCCTGTGTGGAAAAGCTCCTCCACCTCGAAACTCTAGAGCTCCCCCAAGACTAACTGTGGAGTCC
CCTAACCGAGCTACTTCAACGGAAACTAGCTCATCTGTAGAGACTGATGTGCAGCCCTTCCCGGAAACTGTAGCTCTGCA
TGGGCTTAGTGGTGCGATGGCCAGCATAGCGCGCTCCAGTCCAGGCTCTCCTCCACGGGTAAGCAGCGGATCGAATGCTC
GTAGTCGGAGAAGTGGACTCCACGATGTCGATGTGAACACTTTCACATCAGAAGAAATGGCACTCCACTTGGACAATGGT
GGAGCTAGAAAGCGTACCTCAGCCCAATGGGGCGATGTCTTTACAGACTCAACAACCCATAAACGCAACAGAATGATCTA
A

Library Parental gene expression (RPM)
SRP012922_ascending_colon 7 .78 RPM
SRP012922_cerebellum 5 .36 RPM
SRP012922_heart 5 .34 RPM
SRP012922_kidney 3 .56 RPM
SRP012922_liver 4 .64 RPM
SRP012922_lung 10 .23 RPM
SRP012922_quadricep_muscle 7 .27 RPM
SRP012922_spleen 8 .70 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000010719 ortholog_one2many 2 retrogenes
retro_amel_1715, retro_amel_88,
Canis familiaris ENSCAFG00000018981 ortholog_one2many 1 retrogene
retro_cfam_147,
Cavia porcellus ENSCPOG00000010925 ortholog_one2many 1 retrogene
retro_cpor_101,
Equus caballus ENSECAG00000009430 ortholog_one2many 1 retrogene
retro_ecab_1091,
Homo sapiens ENSG00000182831 ortholog_one2many 1 retrogene
retro_hsap_4765,
Gorilla gorilla ENSGGOG00000010744 ortholog_one2many 1 retrogene
retro_ggor_2968,
Monodelphis domestica ENSMODG00000005378 ortholog_one2many 2 retrogenes
retro_mdom_1716, retro_mdom_299,
Mustela putorius furo ENSMPUG00000014707 ortholog_one2many 1 retrogene
retro_mputfur_44,
Mus musculus ENSMUSG00000022507 ortholog_one2many 1 retrogene
retro_mmus_3460,
Nomascus leucogenys ENSNLEG00000010106 ortholog_one2many 1 retrogene
retro_nleu_2348,
Otolemur garnettii ENSOGAG00000003909 ortholog_one2many 1 retrogene
retro_ogar_74,
Pongo abelii ENSPPYG00000007088 ortholog_one2many 1 retrogene
retro_pabe_163,
Pan troglodytes ENSPTRG00000007751 ortholog_one2many 1 retrogene
retro_ptro_3172,
Rattus norvegicus ENSRNOG00000002545 ortholog_one2many 2 retrogenes
retro_rnor_156, retro_rnor_1928,
Sus scrofa ENSSSCG00000028454 ortholog_many2many 1 retrogene
retro_sscr_1177,
Ictidomys tridecemlineatus ENSSTOG00000009324 ortholog_one2many 1 retrogene
retro_itri_137,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_827 77.13 94.36
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2. retro_dnov_1575 80.25 86.84
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3. retro_dnov_2266 74.76 74.81
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Download FASTA sequences of all ENSDNOG00000015893 retrocopies