Parental gene: | Hn1, ENSMUSG00000020737 |
| Aliases: | None |
| Description: | hematological and neurological expressed sequence 1 [Source:MGI Symbol;Acc:MGI:1096361] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 11:115497352..115514387(-) |
>ENSMUSG00000020737
ATGACCACTACCACTACCTTTAAGGGTGTGGACCCTAACAGCAGGAACAGCTCCCGGGTTTTGCGGCCTCCAGGTGGTGG
GTCCAATTTTTCATTAGGCTTTGATGAGCCAGCAGAACAGCCTGTGAGGAAGAACAAGATGGCTTCTAACATCTTTGGGA
CACCGGAAGAGAACCCCCCATCTTGGGCCAAGTCAGCAGGTTCCAAGTCTAGTGGTGGCAGGGAAGATTCGGAGTCGCCT
GGAACACAGAGAAGTAACTCTTCTGAAGCAAGCTCTGGAGATTTCTTAGACCTCAAGGGAGAAGGTGATATGCATGAAAA
TGTGGACACAGACTTCCAAGCCAACCTGGCGCAGATGGAGGAGAAGCCAGTGCCCGCTGCTCCTGTGCCCAGCCCAGTGG
CTCCAGCCCCAGTGCCATCCAGGAGAAACCCCCCTGGCGGCAAGTCCAGCCTGGTCTTGGGTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 32 .85 RPM |
| SRP007412_cerebellum | 14 .20 RPM |
| SRP007412_heart | 30 .85 RPM |
| SRP007412_kidney | 26 .83 RPM |
| SRP007412_liver | 5 .54 RPM |
| SRP007412_testis | 184 .97 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000014553 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000013294 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000189159 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000013996 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000013971 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000000610 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000002950 | ortholog_one2one | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000010887 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000024246 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000003661 | ortholog_one2many | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000015171 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_864 | 77.78 | 58.44 | Please wait, loading  |
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| 2. | retro_mmus_934 | 92.22 | 58.44 | Please wait, loading |
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| 3. | retro_mmus_1096 | 69.48 | 99.35 | Please wait, loading |
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| 4. | retro_mmus_2442 | 83.12 | 99.35 | Please wait, loading |
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| 5. | retro_mmus_2574 | 71.84 | 65.58 | Please wait, loading |
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| 6. | retro_mmus_3706 | 62.60 | 83.77 | Please wait, loading |
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Download FASTA sequences of all ENSMUSG00000020737 retrocopies