Parental gene:

Tox4, ENSMUSG00000016831

Aliases:Tox4, 5730589K01Rik, A630040M18, AA410149, LCP1
Description:TOX high mobility group box family member 4 [Source:MGI Symbol;Acc:MGI:1915389]
Organism:Mouse (Mus musculus)
Coordinates:14:52279145..52296391(+)


>ENSMUSG00000016831
ATGGAGTTTCCCGGAGGAAATGACAATTACCTGACGATCACTGGGCCCTCGCACCCTTTCCTGTCAGGAGCCGAGACATT
CCATACACCAAGCTTGGGCGATGAGGAATTTGAAATTCCACCTATCTCCTTGGACTCTGATCCCTCACTGGCTGTCTCAG
ATGTGGTTGGCCACTTTGATGACCTGGCAGACCCCTCCTCTTCACAGGATGGCAGCTTTTCAGCTCAATACGGGGTCCAG
ACATTGGACATGCCTGTGGGCATGACCCATGGCTTGATGGAGCAGGGCGGGGGGCTCCTGAGTGGGGGCTTGACTATGGA
CCTGGACCATTCTATAGGAACTCAGTATAGTGCCAACCCACCTGTTACAATTGATGTACCAATGACAGACATGACATCTG
GCTTAATGGGACACAGCCAGTTGACCACTATTGATCAGTCAGAACTGAGTTCTCAACTTGGTTTGAGTTTAGGAGGTGGC
ACCATCTTGCCACCTGCCCAGTCACCTGAGGATCGTCTTTCAACTACTCCTTCACCTACCAATTCACTTCATGAGGATGG
TGTTGATGATTTCCGGAGGCAACTTCCCGCCCAGAAGACAGTGGTAGTGGAAACAGGGAAAAAGCAAAAGGCTCCCAAGA
AGAGAAAAAAGAAAGACCCAAATGAACCTCAGAAGCCAGTCTCTGCGTATGCATTGTTCTTTCGAGATACGCAGGCTGCC
ATCAAGGGACAAAACCCAAACGCAACCTTTGGGGAGGTATCGAAGATTGTGGCTTCCATGTGGGACAGTCTTGGAGAGGA
ACAGAAGCAGGTGTACAAGCGGAAGACTGAGGCTGCCAAGAAAGAGTATCTCAAGGCACTAGCTGCTTATAAAGACAACC
AGGAATGCCAGGCTACTGTGGAAACAGTGGAATTAGATCCTGTGCCACAGTCACAGACTCCTTCCCCACCTCCTGTGACT
GCTGCTGACCCAGCATCTCCAGCACCAGCCTCAACGGAGTCTCCTGCTTTGCCCCCTTGCATCATAGTGAATTCCACGCT
TTCATCTTACGTGGCAAACCAAGCCTCTTCTGGGCCTGGAGGTCAGCCCAATATTACCAAGTTGATTATTACCAAACAGA
TGTTGCCTTCTTCTATCACCATGTCCCAAGGTGGAATGGTTACTGTTATCCCAGCCACAGTGGTTACCTCCCGTGGGCTC
CAGGTAGGCCAAACAAGTACAGCTACTATTCAGCCAAGCCAGCAGGCCCAGATTGTCACCCGGTCAGTGTTGCAGGCAGC
TGCAGCTGCTGCTGCTTCCATGCAACTGCCTCCACCCCGACTACAGCCTCCTCCGTTGCAACAGATGCCTCAGCCCCCAA
CTCAACAGCAAGTAACCATTCTACAGCAACCCCCTCCACTTCAGGCCATGCAGCAACCTCCACCTCAGAAAGTTAGAATC
AACTTACAGCAGCAGCCACCACCTCTGCAGAGCAAGATTGTGCCTCCACCCACTCTGAAAATACAGACTACTGTGGTCCC
TCCAACTGTAGAAAGCAGTCCTGAGCAGCCTATGAACAGCAGCCCCGAGGCCCACACAGTAGAGGCAACCTCTCCTGAGA
CAATCTGTGAAATGATCGCAGATGTAGTTCCTGAGGTGGAGTCTCCTTCTCAGATGGATGTTGAATTGGTGAGTGGCTCC
CCTGTGGCACTGTCACCTCAGCCTCGATGTGTGAGGTCTGGTTGTGAGAACCCTCCTGTTGTCAGTAAGGACTGGGACAA
CGAGTACTGCAGCAATGAGTGTGTGGTGAAGCACTGCAGGGATGTATTCTTGGCCTGGGTGGCCTCTAGAAATCCAAACT
CTGTGGTGTTTGTGAAGTAG

Library Parental gene expression (RPM)
SRP007412_brain 60 .21 RPM
SRP007412_cerebellum 62 .53 RPM
SRP007412_heart 45 .01 RPM
SRP007412_kidney 50 .20 RPM
SRP007412_liver 32 .63 RPM
SRP007412_testis 65 .04 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006261 ortholog_one2many 1 retrogene
retro_amel_858,
Canis familiaris ENSCAFG00000005647 ortholog_one2many 2 retrogenes
retro_cfam_1625, retro_cfam_1698,
Choloepus hoffmanni ENSCHOG00000000714 ortholog_one2many 2 retrogenes
retro_chof_2239, retro_chof_631,
Homo sapiens ENSG00000092203 ortholog_one2many 1 retrogene
retro_hsap_2970,
Macropus eugenii ENSMEUG00000010501 ortholog_one2many 1 retrogene
retro_meug_1384,
Mustela putorius furo ENSMPUG00000000181 ortholog_one2many 1 retrogene
retro_mputfur_718,
Nomascus leucogenys ENSNLEG00000014556 ortholog_one2many 1 retrogene
retro_nleu_2027,
Pongo abelii ENSPPYG00000005598 ortholog_one2many 1 retrogene
retro_pabe_2463,
Pan troglodytes ENSPTRG00000006126 ortholog_one2many 1 retrogene
retro_ptro_2008,
Sus scrofa ENSSSCG00000029203 ortholog_one2many 1 retrogene
retro_sscr_361,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_11 93.56 99.52
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Download FASTA sequences of all ENSMUSG00000016831 retrocopies