Parental gene:

TOX4, ENSAMEG00000006261

Aliases:None
Description:None
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL193688.1:41705..54785(-)


>ENSAMEG00000006261
TTCCAGTTTCCCGGAGGAAATGACAATTACCTGACGATCACAGGGCCCTCGCACCCCTTCCTGTCAGGGGCCGAGACATT
CCATACACCAAGCTTGGGAGATGAGGAATTTGAAATCCCACCTATCTCCTTGGATTCTGATCCCTCACTGGCTGTCTCAG
ATGTGGTTGGCCACTTTGATGACCTGGCAGACCCCTCCTCCTCTCAGGATGGCAGCTTTTCAGCCCAATATGGGGTCCAG
ACATTGGACATGCCTGTGGGCATGACCCATGGCTTGATGGAGCAGGGCGGGGGGCTCCTGAGTGGGGGCTTGACCATGGA
CTTGGACCATTCTATAGGAACTCAGTATAGTGCCAACCCACCTGTTACAATTGATGTACCAATGACAGACATGACATCTG
GCTTGATGGGGCATAGCCAGTTGACCACCATTGATCAGTCAGAACTGAGTTCTCAACTTGGTTTGAGCTTAGGGGGTGGC
ACCATCCTGCCACCTGCCCAGTCACCTGAGGATCGTCTTTCAACCACCCCTTCACCTACTAGTTCACTTCATGAGGATGG
TGTTGAGGATTTCCGGAGGCAACTTCCCAGCCAGAAGACAGTTGTGGAAGCAGGAAAAAAGCAGAAGGCCCCAAAGAAGA
GAAAAAAGAAAGACCCTAACGAGCCTCAGAAGCCAGTTTCAGCATATGCTTTATTCTTTCGTGATACACAGGCTGCCATC
AAGGGACAGAATCCCAATGCCACTTTTGGGGAGGTGTCAAAAATTGTGGCCTCCATGTGGGATAGTCTTGGAGAGGAGCA
AAAACAGGTGTATAAGAGGAAAACTGAAGCTGCCAAGAAAGAGTATCTGAAGGCTCTGGCTGCATATAAAGACAATCAAG
AGTGTCAGGCCACTGTGGAAGCAGTAGAATTGGATCCAGTGCCACCATCACAGACTCCTTCTCCACCTCCTATGGCTACT
GTTGACCCAGCATCTCCAGCACCAGCCTCAACAGAGCCCCCTGCCCTGTCCCCTTCCATTGTTGTTAACTCCACTCTTTC
CTCCTATGTGGCAAACCAGGCATCTTCTGGGGCTGGCGGTCAGCCCAATATCACCAAGTTGATTATTACCAAACAGATGT
TGCCCTCTTCTATTACTATGTCTCAAGGAGGGATGGTTACCGTTATCCCAGCCACAGTGGTGACCTCCCGGGGGATCCAG
CTAGGCCAAACCAGTACAGCCACTATCCAGCCCAGTCAACAAGCCCAAATTGTCACTCGCTCGGTGTTGCAGGCAGCGGC
AGCAGCTGCTGCTTCCATGCAACTACCGCCACCCCGCTTACAACCCCCTCCCCTGCAACAGATGCCTCAGCCCCCCACTC
AGCAGCAAGTGACCATTCTGCAGCAGCCTCCCCCACTTCAGGCCATGCAACAGCCTCCACCTCAGAAAGTTCGAATCAAT
TTACAGCAACAGCCACCTCCTCTGCAGATCAAGATTGTCCCCCCACCCACTCTGAAAATGCAGACAACCTTAGTCCCACC
AGCTGTGGAAAGTAGTCCTGAGCGGCCTGTGAACAACAGCCCTGAGGCCCATACAGTGGAGGAGACCTCTCCTGAGACAA
TCTGTGAGATGATCACAGATGTAGTTCCTGAGGTTGAGTCTCCTTCTCAAATGGATGTTGAATTGGTGAGTGGGTCTCCT
GTGACACTCTCACCCCAGCCTCGATGTGTGAGGTCTGGCTGCGAGAACCCTCCAGTTGTGAGTAAGGACTGGGACAATGA
GTACTGCAGCAGTGAATGTGTGGTGAAGCACTGCAGGGATGTCTTCTTGGCCTGGGTGGCCTCTCGAAATTCCAACACAG
TGGTGTTTGTGAAGTAA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000005647 ortholog_one2one 2 retrogenes
retro_cfam_1625, retro_cfam_1698,
Choloepus hoffmanni ENSCHOG00000000714 ortholog_one2one 2 retrogenes
retro_chof_2239, retro_chof_631,
Homo sapiens ENSG00000092203 ortholog_one2one 1 retrogene
retro_hsap_2970,
Macropus eugenii ENSMEUG00000010501 ortholog_one2one 1 retrogene
retro_meug_1384,
Mustela putorius furo ENSMPUG00000000181 ortholog_one2one 1 retrogene
retro_mputfur_718,
Mus musculus ENSMUSG00000016831 ortholog_one2many 1 retrogene
retro_mmus_11,
Nomascus leucogenys ENSNLEG00000014556 ortholog_one2one 1 retrogene
retro_nleu_2027,
Pongo abelii ENSPPYG00000005598 ortholog_one2one 1 retrogene
retro_pabe_2463,
Pan troglodytes ENSPTRG00000006126 ortholog_one2one 1 retrogene
retro_ptro_2008,
Sus scrofa ENSSSCG00000029203 ortholog_one2one 1 retrogene
retro_sscr_361,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_858 65.70 59.06
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Download FASTA sequences of all ENSAMEG00000006261 retrocopies