Parental gene:

RPS25, ENSMODG00000013334

Aliases:None
Description:ribosomal protein S25 [Source:HGNC Symbol;Acc:10413]
Organism:Opossum (Monodelphis domestica)
Coordinates:4:230985172..230989852(+)


>ENSMODG00000013334
CAGCCTCCCAAGGACGACAAGAAGAAGAAGGATGCCGGCAAGTCGGCCAAGAAGGACAAGGATCCCGTGAACAAGTCCGG
TGGCAAAGCTAAGAAGAAGGTAAAGGCGATCTGGGGAAAAGTTCGAGACAAGCTCAACAATCTGGTTCTGTTTGACAAAG
CAACATATGACAAACTCTGCAAGGAGGTCCCCAACTATAAACTTATCACGCCTGCAGTAGTCTCAGAGAGACTGAAGATC
CGAGGTTCTCTAGCCCGAGCAGCCCTCCAGGAACTGCTTAGTAAAGGTCTGATTAAGTTGGTTTCCAAACACAGAGCACA
AGTGATATATACTAGGAACACCAAGGGTGGAGATGCTCCAGCTGCTGAAGATGCATGA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000051 ortholog_one2one 5 retrogenes
retro_amel_1654, retro_amel_1765, retro_amel_574, retro_amel_60, retro_amel_684,
Canis familiaris ENSCAFG00000012395 ortholog_one2one 3 retrogenes
retro_cfam_500, retro_cfam_680, retro_cfam_984,
Cavia porcellus ENSCPOG00000013298 ortholog_one2one 2 retrogenes
retro_cpor_705, retro_cpor_9,
Felis catus ENSFCAG00000001151 ortholog_one2one 3 retrogenes
retro_fcat_1792, retro_fcat_601, retro_fcat_903,
Loxodonta africana ENSLAFG00000017117 ortholog_one2one 6 retrogenes
retro_lafr_1074, retro_lafr_270, retro_lafr_387, retro_lafr_431, retro_lafr_478, retro_lafr_90,
Microcebus murinus ENSMICG00000002687 possible_ortholog 8 retrogenes
retro_mmur_1023, retro_mmur_1514, retro_mmur_229, retro_mmur_308, retro_mmur_387, retro_mmur_425, retro_mmur_485, retro_mmur_688,
Myotis lucifugus ENSMLUG00000004752 ortholog_one2one 15 retrogenes
retro_mluc_1166, retro_mluc_1482, retro_mluc_1514, retro_mluc_1541, retro_mluc_1665, retro_mluc_1762, retro_mluc_1794, retro_mluc_1947, retro_mluc_2030, retro_mluc_2394, retro_mluc_467, retro_mluc_523, retro_mluc_649, retro_mluc_669, retro_mluc_903,
Mustela putorius furo ENSMPUG00000004960 ortholog_one2one 4 retrogenes
retro_mputfur_1288, retro_mputfur_372, retro_mputfur_525, retro_mputfur_671,
Sus scrofa ENSSSCG00000015103 ortholog_one2one 12 retrogenes
retro_sscr_1020, retro_sscr_1034, retro_sscr_1035, retro_sscr_1055, retro_sscr_1079, retro_sscr_1107, retro_sscr_1172, retro_sscr_223, retro_sscr_368, retro_sscr_594, retro_sscr_717, retro_sscr_930,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_1267 71.54 97.60
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2. retro_mdom_1615 54.81 83.20
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Download FASTA sequences of all ENSMODG00000013334 retrocopies