Parental gene:

MMU.9617, ENSMMUG00000023454

Aliases:None
Description:Pyruvate kinase [Source:UniProtKB/TrEMBL;Acc:F7F0E2]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:7:50845294..50878675(-)


>ENSMMUG00000023454
ATGTCGAAGCCCCATAGTGAAGCCGGGACTGCCTTCATTCAGACCCAGCAGCTGCATGCAGCCATGGCTGACACATTCCT
GGAGCACATGTGCCGCCTGGACATTGACTCACCACCCATCACAGCCCGGAACACTGGCATCATCTGTACCATTGGCCCAG
CTTCCCGATCAGTGGAGACGTTGAAGGAGATGATTAAGTCTGGAATGAATGTGGCTCGTCTGAACTTCTCTCATGGAACT
CATGAGTACCACGCGGAGACCATCAAGAATGTGCGCACAGCCACGGAAAGCTTTGCTTCTGACCCCATCCTCTACCGGCC
CGTTGCTGTGGCTCTGGACACTAAAGGACCTGAGATCCGAACTGGGCTCATCAAGGGCAGCGGCACTGCAGAGGTGGAGC
TGAAGAAGGGAGCCACTCTCAAAATCACGCTGGATAACGCCTACATGGAAAAGTGTGACGAGAACATCCTATGGCTGGAC
TACAAGAACATCTGCAAGGTGGTGGAAGTGGGCAGCAAGATCTACGTGGATGATGGGCTTATTTCTCTCCAGGTGAAGCA
GAAAGGTGCTGACTTCCTGGTGACGGAGGTGGAAAATGGTGGCTCCTTGGGCAGCAAGAAGGGTGTGAACCTTCCTGGGG
CTGCTGTGGACTTGCCTGCTGTGTCGGAAAAGGACATCCAGGATCTGAAGTTTGGGGTCGAGCAGGATGTCGATATGGTG
TTTGCGTCGTTCATCCGCAAGGCAGCTGATGTCCATGAAGTTAGGAAGGTCCTGGGAGAGAAGGGAAAGAACATCAAGAT
AATCAGCAAAATCGAGAATCATGAGGGGAGTAAGATGTTTGATGAAATCCTGGAGGCCAGTGATGGGATCATGGTGGCTC
GTGGTGATCTAGGCATTGAGATTCCTGCGGAGAAGGTCTTCCTTGCTCAGAAGATGATGATTGGGCGGTGCAACCGAGCT
GGGAAGCCTGTCATCTGTGCTACTCATTGCATCATGCTGGAGAGCATGATCAAGAAGCCCCGCCCCACCCGGGCTGAAGG
CAGTGATGTGGCCAATGCAGTTCTGGATGGAGCCGACTGCATCATGCTGTCTGGAGAAACAGCCAAAGGGGACTATCCTC
TGGAGGCTGTGCGCATGCAGCACCTGATTGCCCGTGAGGCAGAGGCCGCCATCTACCACTTGCAATTATTTGAGGAACTC
CGCCGCCTGGCGCCCATTACCAGCGACCCCACAGAAGCCACCGCCGTGGGTGCCGTGGAGGCCTCCTTCAAGTGCTGCAG
TGGGGCCATAATCGTCCTCACCAAGTCTGGCAGGTCTGCTCATCAGGTGGCCAGATACCGCCCACGTGCCCCCATCATTG
CTGTGACCCGGAATCCCCAGACAGCTCGTCAGGCCCACCTGTACCGTGGCATCTTCCCTGTGCTGTGCAAGGACCCAGTC
CAGGAGGCCTGGGCTGAGGACGTGGACCTCCGGGTGAACTTTGCCATGAATGTTGGCAAGGCCCGAGGCTTCTTCAAGAA
GGGAGATGTGGTCATTGTGCTGACCGGATGGCGCCCTGGCTCCGGCTTCACCAACACCATGCGTGTTGTTCCTGTGCCGT
GA

Library Parental gene expression (RPM)
SRP007412_brain 137 .04 RPM
SRP007412_brain_prefrontal_cortex 581 .73 RPM
SRP007412_cerebellum 121 .53 RPM
SRP007412_heart 171 .18 RPM
SRP007412_kidney 60 .33 RPM
SRP007412_liver 9 .54 RPM
SRP007412_testis 65 .89 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013504 ortholog_one2many 1 retrogene
retro_chof_1430,
Callithrix jacchus ENSCJAG00000018473 possible_ortholog 1 retrogene
retro_cjac_236,
Felis catus ENSFCAG00000000653 possible_ortholog 1 retrogene
retro_fcat_105,
Homo sapiens ENSG00000067225 possible_ortholog 2 retrogenes
retro_hsap_210, retro_hsap_3418,
Gorilla gorilla ENSGGOG00000005062 possible_ortholog 1 retrogene
retro_ggor_281,
Macropus eugenii ENSMEUG00000004506 ortholog_one2many 3 retrogenes
retro_meug_1482, retro_meug_2043, retro_meug_912,
Mus musculus ENSMUSG00000032294 ortholog_one2many 8 retrogenes
retro_mmus_1402, retro_mmus_1678, retro_mmus_1754, retro_mmus_2065, retro_mmus_2066, retro_mmus_2636, retro_mmus_3509, retro_mmus_854,
Nomascus leucogenys ENSNLEG00000013869 possible_ortholog 3 retrogenes
retro_nleu_1859, retro_nleu_2319, retro_nleu_2716,
Pongo abelii ENSPPYG00000006613 ortholog_one2many 3 retrogenes
retro_pabe_2834, retro_pabe_3645, retro_pabe_429,
Pan troglodytes ENSPTRG00000007246 possible_ortholog 2 retrogenes
retro_ptro_2322, retro_ptro_335,
Rattus norvegicus ENSRNOG00000011329 ortholog_many2many 6 retrogenes
retro_rnor_1120, retro_rnor_2050, retro_rnor_2253, retro_rnor_2703, retro_rnor_515, retro_rnor_830,
Sarcophilus harrisii ENSSHAG00000010300 ortholog_many2many 1 retrogene
retro_shar_90,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_183 95.50 100.00
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Download FASTA sequences of all ENSMMUG00000023454 retrocopies