Parental gene:

PKM, ENSG00000067225

Aliases:PKM, CTHBP, HEL-S-30, OIP3, PK3, PKM2, TCB, THBP1
Description:pyruvate kinase, muscle [Source:HGNC Symbol;Acc:9021]
Organism:Human (Homo sapiens)
Coordinates:15:72491369..72524164(-)


>ENSG00000067225
ATGTCGAAGCCCCATAGTGAAGCCGGGACTGCCTTCATTCAGACCCAGCAGCTGCACGCAGCCATGGCTGACACATTCCT
GGAGCACATGTGCCGCCTGGACATTGATTCACCACCCATCACAGCCCGGAACACTGGCATCATCTGTACCATTGGCCCAG
CTTCCCGATCAGTGGAGACGTTGAAGGAGATGATTAAGTCTGGAATGAATGTGGCTCGTCTGAACTTCTCTCATGGAACT
CATGAGTACCATGCGGAGACCATCAAGAATGTGCGCACAGCCACGGAAAGCTTTGCTTCTGACCCCATCCTCTACCGGCC
CGTTGCTGTGGCTCTAGACACTAAAGGACCTGAGATCCGAACTGGGCTCATCAAGGGCAGCGGCACTGCAGAGGTGGAGC
TGAAGAAGGGAGCCACTCTCAAAATCACGCTGGATAACGCCTACATGGAAAAGTGTGACGAGAACATCCTGTGGCTGGAC
TACAAGAACATCTGCAAGGTGGTGGAAGTGGGCAGCAAGATCTACGTGGATGATGGGCTTATTTCTCTCCAGGTGAAGCA
GAAAGGTGCCGACTTCCTGGTGACGGAGGTGGAAAATGGTGGCTCCTTGGGCAGCAAGAAGGGTGTGAACCTTCCTGGGG
CTGCTGTGGACTTGCCTGCTGTGTCGGAGAAGGACATCCAGGATCTGAAGTTTGGGGTCGAGCAGGATGTTGATATGGTG
TTTGCGTCATTCATCCGCAAGGCATCTGATGTCCATGAAGTTAGGAAGGTCCTGGGAGAGAAGGGAAAGAACATCAAGAT
TATCAGCAAAATCGAGAATCATGAGGGGGTTCGGAGGTTTGATGAAATCCTGGAGGCCAGTGATGGGATCATGGTGGCTC
GTGGTGATCTAGGCATTGAGATTCCTGCAGAGAAGGTCTTCCTTGCTCAGAAGATGATGATTGGACGGTGCAACCGAGCT
GGGAAGCCTGTCATCTGTGCTACTCAGATGCTGGAGAGCATGATCAAGAAGCCCCGCCCCACTCGGGCTGAAGGCAGTGA
TGTGGCCAATGCAGTCCTGGATGGAGCCGACTGCATCATGCTGTCTGGAGAAACAGCCAAAGGGGACTATCCTCTGGAGG
CTGTGCGCATGCAGCACCTGATAGCTCGTGAGGCTGAGGCAGCCATGTTCCACCGCAAGCTGTTTGAAGAACTTGTGCGA
GCCTCAAGTCACTCCACAGACCTCATGGAAGCCATGGCCATGGGCAGCGTGGAGGCTTCTTATAAGTGTTTAGCAGCAGC
TTTGATAGTTCTGACGGAGTCTGGCAGGTCTGCTCACCAGGTGGCCAGATACCGCCCACGTGCCCCCATCATTGCTGTGA
CCCGGAATCCCCAGACAGCTCGTCAGGCCCACCTGTACCGTGGCATCTTCCCTGTGCTGTGCAAGGACCCAGTCCAGGAG
GCCTGGGCTGAGGACGTGGACCTCCGGGTGAACTTTGCCATGAATGTTGGCAAGGCCCGAGGCTTCTTCAAGAAGGGAGA
TGTGGTCATTGTGCTGACCGGATGGCGCCCTGGCTCCGGCTTCACCAACACCATGCGTGTTGTTCCTGTGCCGTGA

Library Parental gene expression (RPM)
bodymap2_adipose 253 .23 RPM
bodymap2_adrenal 405 .32 RPM
bodymap2_brain 596 .88 RPM
bodymap2_breast 314 .30 RPM
bodymap2_colon 302 .49 RPM
bodymap2_heart 527 .14 RPM
bodymap2_kidney 802 .38 RPM
bodymap2_liver 21 .21 RPM
bodymap2_lung 317 .58 RPM
bodymap2_lymph_node 426 .80 RPM
bodymap2_ovary 321 .21 RPM
bodymap2_prostate 477 .51 RPM
bodymap2_skeletal_muscle 248 .10 RPM
bodymap2_testis 418 .05 RPM
bodymap2_thyroid 434 .59 RPM
bodymap2_white_blood_cells 644 .17 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013504 ortholog_one2one 1 retrogene
retro_chof_1430,
Callithrix jacchus ENSCJAG00000018473 ortholog_one2one 1 retrogene
retro_cjac_236,
Felis catus ENSFCAG00000000653 possible_ortholog 1 retrogene
retro_fcat_105,
Gorilla gorilla ENSGGOG00000005062 ortholog_one2one 1 retrogene
retro_ggor_281,
Macropus eugenii ENSMEUG00000004506 ortholog_one2one 3 retrogenes
retro_meug_1482, retro_meug_2043, retro_meug_912,
Macaca mulatta ENSMMUG00000023454 possible_ortholog 1 retrogene
retro_mmul_183,
Nomascus leucogenys ENSNLEG00000013869 ortholog_one2one 3 retrogenes
retro_nleu_1859, retro_nleu_2319, retro_nleu_2716,
Pan troglodytes ENSPTRG00000007246 ortholog_one2one 2 retrogenes
retro_ptro_2322, retro_ptro_335,
Rattus norvegicus ENSRNOG00000011329 possible_ortholog 6 retrogenes
retro_rnor_1120, retro_rnor_2050, retro_rnor_2253, retro_rnor_2703, retro_rnor_515, retro_rnor_830,
Sarcophilus harrisii ENSSHAG00000010300 ortholog_one2many 1 retrogene
retro_shar_90,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_210 87.04 66.80
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2. retro_hsap_3418 83.50 55.74
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Download FASTA sequences of all ENSG00000067225 retrocopies