Parental gene:

DDX18, ENSMMUG00000021343

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:13:123991539..124008539(+)


>ENSMMUG00000021343
ATGTCTCACCTGCCGATGAAACTCCTGCGTAAGAAGATCGAGAAGCGCAACCTCAAATTGCGGCAGCGGAACCTAAAGTT
GCAGGGGGCCTCAAATCTGACCCTATCAGAAACTCAAAATGGAGATGTATCTGAAGAAACAATGGGAGGTGGAAAGGTTA
AAAAATCAAAACATTGTGTGAATGTGGGCTTATCAGAAACTCAAAATGGAAACATGTCTCAAGAAGCAGTGGGAAATATA
AAAGTTAAAAAATCTCCCCAGAAATCCACCGTATTAACCAATGGAGAAGCAGCACTGCAGTCTCCCAATTCAGAATCAAA
AAAGAAAAAGAAGAAGAAAAAGAGGAAAACGGTGAATGATGCTGGGCCTGATGCAAAAAAAGCAAAAACTGAAAACAAAG
GGGAATCTGAAGAAGAAAATGCCAAGACTCCTAAAGAAACAGAAAATAACGTGGAGAAGCCAGATAATGATGAAGATGAC
AGTGAGGTGCCCAGCCTGCCCCTGGGACTGACAGGAGCTTTTGAGGATACTTCATTTGCTTCTCTATGTAATCTTGTCAA
TGAAAACACTCTGAAGGCAATAAAAGAAATGGGTTTTACAAACATGACTGAAATTCAGCATAAAAGCATCAGACCACTTC
TGGAAGGCAGGTATTTAACACTGAAGCTTAGATACTGGCATCTGCTTTTAGAACTAAACATACCAGTATATTCTGTTGAT
TTTCTGCTATATGTTGGTGTTGGAAAGATGTTCACTTCTGTTGTAGCACATAGACATCATCTTGTTCATGTTCTAGCCTT
AGTGCCTAAAGAGCTAATGACTCACCACGTGCATACCTATGGCTTGATAATGGGTGGCAGTAACAGATCTGCTGAAGCAC
AGAAACTCGCTAATGGGATCAACATCATTGTGGCCACACCAGGCCGTCTGTTGGACCATATGCAGAATACCCCAGGGTTT
ATGTATAAAAACCTTCAGTGTCTGGTTATTGATGAAGCTGATCGTATCTTGGATGTTGGGTTTGAAGAAGAATTAAAGCA
AATTATTAAACTTTTGCCAAGTAAAAAAACTGTGCTAATGCCAGAACTTTACCATAGCCAAGTGAGGTATTTTGCTGATT
TCTCTGAAAAGGAGCCATTGTATGTTGGTGTTGACGATGATAAAGCTAATGCAACAGTGGATGGTCTTGAGCAGGGATAC
GTTGTTTGTCCTTCTGAAAAGAGATTCCTTCTGCTCTTTACATTCCTTAAGAAGAACCGAAAGAAGAAGCTTATGGTCTT
CTTTTCGTCTTGTATGTCTGTGAAATACCACTATGAGTTGCTGAACTACATTGATTTGCCCGTCTTGGCCATTCATGGAA
AGCAAAAGCAAAATAAGCGTACAACCACATTCTTCCAGTTCTGCAACGCAGATTCGGGAACACTATTGTGTACGGATGTG
GCAGCAAGAGGACTAGACATTCCTGAAGTGGACTGGATTGTTCAGTATGACCCTCCGGATGACCCTAAGGAATATATTCA
TCGTGTGGGTAGAACAGCCAGGGGCCTAAATGGGAGAGGGCATGCCTTGCTTATATTGCGCCCAGAAGAATTGGGTTTTC
TTCGCTACTTGAAACAATCCAAGGTTCCATTAAGTGAATTTGACTTTTCCTGGTCTAAAATTTCTGACATTCAGTCTCAG
CTTGAGAAATTGATCGAAAAGAACTACTTTCTTCATAAGTCAGCCCAGGAAGCATATAAGTCGTACATACGAGCCTATGA
TTCCCATTCTCTGAAACAGATCTTTAATGTTAATAACTTAAACTTGCCTCAAGTTGCTCTGTCATTTGGTTTCAAGGTGC
CTCCCTTCGTTGATCTGAACGTCAACAGCAACGAAGGCAAGCAGAGAAAGCGAGGAGGTGGTGGTGGATTTGGCTACCAG
AAAACCAAGAAAGTTGAGAAGTCCAAAATCTTTAAACACATTAGCAAGAAATCATCTGACAGCAGGCAGTTCTGTCACTG
A

Library Parental gene expression (RPM)
SRP007412_brain 26 .33 RPM
SRP007412_brain_prefrontal_cortex 21 .82 RPM
SRP007412_cerebellum 45 .14 RPM
SRP007412_heart 14 .01 RPM
SRP007412_kidney 26 .99 RPM
SRP007412_liver 10 .61 RPM
SRP007412_testis 15 .91 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000004950 possible_ortholog 2 retrogenes
retro_cfam_1404, retro_cfam_2116,
Choloepus hoffmanni ENSCHOG00000004191 possible_ortholog 6 retrogenes
retro_chof_1221, retro_chof_1539, retro_chof_1636, retro_chof_2416, retro_chof_2418, retro_chof_721,
Echinops telfairi ENSETEG00000017166 ortholog_one2many 2 retrogenes
retro_etel_1919, retro_etel_297,
Homo sapiens ENSG00000088205 ortholog_one2one 6 retrogenes
retro_hsap_1361, retro_hsap_1579, retro_hsap_3223, retro_hsap_3561, retro_hsap_608, retro_hsap_834,
Gorilla gorilla ENSGGOG00000028420 ortholog_one2one 4 retrogenes
retro_ggor_1201, retro_ggor_2189, retro_ggor_2402, retro_ggor_535,
Microcebus murinus ENSMICG00000017590 ortholog_one2many 1 retrogene
retro_mmur_1560,
Myotis lucifugus ENSMLUG00000017607 possible_ortholog 1 retrogene
retro_mluc_2279,
Monodelphis domestica ENSMODG00000000533 ortholog_one2many 1 retrogene
retro_mdom_414,
Mus musculus ENSMUSG00000001674 possible_ortholog 1 retrogene
retro_mmus_2865,
Nomascus leucogenys ENSNLEG00000011769 ortholog_one2one 4 retrogenes
retro_nleu_1377, retro_nleu_1396, retro_nleu_266, retro_nleu_437,
Ochotona princeps ENSOPRG00000001701 possible_ortholog 1 retrogene
retro_opri_1039,
Pongo abelii ENSPPYG00000012796 ortholog_one2one 4 retrogenes
retro_pabe_1128, retro_pabe_1301, retro_pabe_2670, retro_pabe_744,
Pan troglodytes ENSPTRG00000012391 ortholog_one2one 5 retrogenes
retro_ptro_1064, retro_ptro_2174, retro_ptro_2419, retro_ptro_448, retro_ptro_933,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_2192 79.06 63.21
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Download FASTA sequences of all ENSMMUG00000021343 retrocopies