Parental gene:

MMU.1655, ENSMMUG00000020627

Aliases:None
Description:60S acidic ribosomal protein P2 [Source:RefSeq peptide;Acc:NP_001180505]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:14:618273..624635(+)


>ENSMMUG00000020627
ATGCGCTACGTCGCCTCCTACCTGCTGGCTGCCCTCGGGGGTAACTCCTCCCCCAGCGCCAAGGACATCAAGAAGATCTT
GGACAGCGTGGGCATCGAGGCGGACGACGACCGACTCAACAAGGTTATTAGTGAGCTGAATGGAAAAAACATTGAAGACG
TCATTGCCCAGGGTATTGGCAAGCTTGCCAGTGTACCTGCCGGTGGGGCTGTGGCCGTCTCCGCTGCCCCAGGCTCTGCA
GCACCTGCTGCTGGTTCCGCGCCTGCTGCAGCAGAGGAGAAGAAAGATGAGAAGAAGGAGGAGTCTGAAGAGTCAGACGA
TGACATGGGATTTGGCCTCTTTGATTAA

Library Parental gene expression (RPM)
SRP007412_brain 4 .82 RPM
SRP007412_brain_prefrontal_cortex 41 .49 RPM
SRP007412_cerebellum 5 .10 RPM
SRP007412_heart 9 .60 RPM
SRP007412_kidney 8 .22 RPM
SRP007412_liver 119 .54 RPM
SRP007412_testis 5 .20 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006935 possible_ortholog 1 retrogene
retro_amel_197,
Bos taurus ENSBTAG00000001777 possible_ortholog 2 retrogenes
retro_btau_117, retro_btau_1399,
Canis familiaris ENSCAFG00000009523 possible_ortholog 1 retrogene
retro_cfam_18,
Ciona intestinalis ENSCING00000000626 ortholog_one2many 1 retrogene
retro_cint_34,
Callithrix jacchus ENSCJAG00000011838 possible_ortholog 6 retrogenes
retro_cjac_2399, retro_cjac_2497, retro_cjac_2539, retro_cjac_2745, retro_cjac_3097, retro_cjac_3859,
Dasypus novemcinctus ENSDNOG00000011513 possible_ortholog 12 retrogenes
retro_dnov_143, retro_dnov_1464, retro_dnov_1498, retro_dnov_1522, retro_dnov_1655, retro_dnov_1693, retro_dnov_1768, retro_dnov_200, retro_dnov_2104, retro_dnov_2293, retro_dnov_335, retro_dnov_366,
Dipodomys ordii ENSDORG00000016458 ortholog_one2many 3 retrogenes
retro_dord_705, retro_dord_706, retro_dord_707,
Echinops telfairi ENSETEG00000010240 possible_ortholog 4 retrogenes
retro_etel_1206, retro_etel_1458, retro_etel_1640, retro_etel_455,
Felis catus ENSFCAG00000008417 possible_ortholog 1 retrogene
retro_fcat_860,
Mustela putorius furo ENSMPUG00000009049 possible_ortholog 1 retrogene
retro_mputfur_254,
Mus musculus ENSMUSG00000025508 ortholog_one2many 4 retrogenes
retro_mmus_1364, retro_mmus_2111, retro_mmus_2282, retro_mmus_330,
Otolemur garnettii ENSOGAG00000016296 possible_ortholog 2 retrogenes
retro_ogar_156, retro_ogar_275,
Petromyzon marinus ENSPMAG00000009576 possible_ortholog 1 retrogene
retro_pmar_15,
Rattus norvegicus ENSRNOG00000002116 ortholog_many2many 3 retrogenes
retro_rnor_257, retro_rnor_320, retro_rnor_388,
Sarcophilus harrisii ENSSHAG00000001056 ortholog_one2many 1 retrogene
retro_shar_321,
Sus scrofa ENSSSCG00000012842 possible_ortholog 1 retrogene
retro_sscr_54,
Tursiops truncatus ENSTTRG00000012450 possible_ortholog 1 retrogene
retro_ttru_1420,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_221 94.78 100.00
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2. retro_mmul_311 98.26 100.00
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Download FASTA sequences of all ENSMMUG00000020627 retrocopies