Parental gene:

STRAP, ENSMMUG00000013307

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:11:16288071..16303880(+)


>ENSMMUG00000013307
GCCGCCGCCATGGCAATGAGACAGACGCCGCTCACCTGCTCTGGCCACACGCGTCCCGTGGTTGATTTGGCCTTCAGTGG
CATCACGCCTTATGGGTATTTCTTAATCAGCGCTTGCAAAGATGGTAAACCTATGCTACGCCAGGGAGATACAGGAGACT
GGATTGGAACATTTTTGGGTCATAAAGGTGCTGTTTGGGGTGCAACACTGAATAAGGATGCCACCAAAGCAGCTACAGCA
GCTGCAGATTTCACAGCCAAAGTGTGGGATGCTGTCTCAGGAGATGAATTGATGACCCTGGCTCATAAACACATTGTCAA
GACTGTGGATTTCACGCAGGATAGTAATTATTTGTTAACCGGGGGACAGGATAAACTGTTACGCATATATGACTTGAACA
AACCCGAAGCCGAACCTAAGGAAATTAGTGGTCACACTTCTGGTATAAAAAAAGCTCTGTGGTGCAGTGAGGATAAACAG
ATTCTTTCTGCTGATGACAAAACTGTTCGACTTTGGGATCATGCTACCATGACAGAAGTAAAATCTCTAAATTTTAATAT
GTCTGTTAGTAGTATGGAATATATTCCTGAGGGAGAGATTTTGGTTATAACTTATGGACGATCTATTGCTTTTCATAGTG
CAGTAAGTTTGGACCCAATTAAATCCTTTGAAGCTCCTGCAACCATCAATTCTGCATCTCTTCATCCTGAGAAAGAATTT
CTTGTTGCAGGTGGTGAAGATTTTAAACTTTATAAGTATGATTATAATAGTGGAGAAGAATTAGTGAGTTTTAGG

Library Parental gene expression (RPM)
SRP007412_brain 24 .76 RPM
SRP007412_brain_prefrontal_cortex 27 .84 RPM
SRP007412_cerebellum 20 .15 RPM
SRP007412_heart 17 .49 RPM
SRP007412_kidney 17 .61 RPM
SRP007412_liver 12 .79 RPM
SRP007412_testis 18 .47 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000007422 ortholog_one2one 2 retrogenes
retro_chof_1098, retro_chof_1620,
Callithrix jacchus ENSCJAG00000021593 ortholog_one2one 1 retrogene
retro_cjac_2503,
Homo sapiens ENSG00000023734 ortholog_one2one 2 retrogenes
retro_hsap_2092, retro_hsap_3723,
Gorilla gorilla ENSGGOG00000009939 ortholog_one2one 1 retrogene
retro_ggor_1633,
Macaca mulatta ENSMMUG00000006119 within_species_paralog 2 retrogenes
retro_mmul_1730, retro_mmul_1733,
Mus musculus ENSMUSG00000030224 ortholog_one2one 1 retrogene
retro_mmus_794,
Nomascus leucogenys ENSNLEG00000004160 ortholog_one2one 2 retrogenes
retro_nleu_1301, retro_nleu_1970,
Ochotona princeps ENSOPRG00000015211 ortholog_one2one 3 retrogenes
retro_opri_1029, retro_opri_217, retro_opri_541,
Pongo abelii ENSPPYG00000004334 ortholog_one2one 3 retrogenes
retro_pabe_2005, retro_pabe_3134, retro_pabe_3212,
Pan troglodytes ENSPTRG00000004734 ortholog_one2one 2 retrogenes
retro_ptro_1538, retro_ptro_2616,
Tursiops truncatus ENSTTRG00000003466 ortholog_one2one 2 retrogenes
retro_ttru_581, retro_ttru_974,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_985 83.75 59.25
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2. retro_mmul_1695 81.29 58.49
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Download FASTA sequences of all ENSMMUG00000013307 retrocopies