Parental gene:

STRAP, ENSGGOG00000009939

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:12:16046431..16066680(+)


>ENSGGOG00000009939
ATGGCAATGAGACAGACGCCGCTCACCTGCTCTGGCCACACGCGGCCCGTGGTTGATTTGGCCTTCAGTGGCATCACGCC
TTATGGGTATTTCTTAATCAGCGCTTGCAAAGATGGTAAACCTATGCTACGCCAGGGAGATACAGGAGACTGGATTGGAA
CATTTTTGGGTCATAAAGGTGCTGTTTGGGGTGCAACACTGAATAAGGATGCCACCAAAGCAGCTACAGCAGCTGCAGAT
TTCACAGCCAAAGTGTGGGATGCTGTCTCAGGAGATGAATTGATGACCCTGGCTCATAAACACATTGTCAAGACTGTGGA
TTTCACGCAGGATAGTAATTATTTGTTAACCGGGGGACAGGATAAACTGTTACGCATATATGACTTGAACAAACCTGAAG
CAGTCAACAAAGAAGTGGCCGGGCGCAGTGGGTCACATTTATCTGGAGCTATCTATTTACTAATAGACAGGAAAATTCAG
AAGAAAATTTGCAGACTTTGGGATCATGCTACTATGACAGAAGTGAAATCTCTAAATTTTAATATGTCTGTTAGTAGTAT
GGAATATATTCCTGAGGGAGAGATTTTGGTTATAACTTATGGACGATCTATTGCTTTTCATAGTGCAGTAAGTTTGGACC
CAATTAAATCCTTTGAAGCTCCTGCAACCATCAATTCTGCATCTCTTCATCCTGAGAAAGAATTTCTTGTTGCAGGTGGT
GAAGATTTTAAACTTTATAAGTATGATTATAATAGTGGAGAAGAATTAGAATCCTACAAGGGACACTTTGGTCCTATTCA
CTGTGTGAGATTTAGTCCTGATGGAGAACTCTATGCCAGTGGTTCAGAAGATGGAACATTGAGACTATGGCAAACTGTGG
TAGGAAAAACGTATGGCCTTTGGAAATGTGTGCTTCCTGAAGAAGATAGTGGTGAGCTGGCAAAGCCAAAGATTGGTTTT
CCAGAGACAACAGAAGAGGAGCTAGAAGAAATTGCTTCAGAGAATTCAGATTGCATCTATCCTTCAGCTCCTGATGTTAA
GGCCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 41 .48 RPM
SRP007412_cerebellum 23 .64 RPM
SRP007412_heart 9 .16 RPM
SRP007412_kidney 28 .17 RPM
SRP007412_liver 14 .30 RPM
SRP007412_testis 45 .27 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000007422 ortholog_one2one 2 retrogenes
retro_chof_1098, retro_chof_1620,
Callithrix jacchus ENSCJAG00000021593 ortholog_one2one 1 retrogene
retro_cjac_2503,
Homo sapiens ENSG00000023734 ortholog_one2one 2 retrogenes
retro_hsap_2092, retro_hsap_3723,
Gorilla gorilla ENSGGOG00000001579 within_species_paralog 3 retrogenes
retro_ggor_2540, retro_ggor_2615, retro_ggor_2623,
Macaca mulatta ENSMMUG00000013307 ortholog_one2one 2 retrogenes
retro_mmul_1695, retro_mmul_985,
Mus musculus ENSMUSG00000030224 ortholog_one2one 1 retrogene
retro_mmus_794,
Nomascus leucogenys ENSNLEG00000004160 ortholog_one2one 2 retrogenes
retro_nleu_1301, retro_nleu_1970,
Ochotona princeps ENSOPRG00000015211 ortholog_one2one 3 retrogenes
retro_opri_1029, retro_opri_217, retro_opri_541,
Pongo abelii ENSPPYG00000004334 ortholog_one2one 3 retrogenes
retro_pabe_2005, retro_pabe_3134, retro_pabe_3212,
Pan troglodytes ENSPTRG00000004734 ortholog_one2one 2 retrogenes
retro_ptro_1538, retro_ptro_2616,
Tursiops truncatus ENSTTRG00000003466 ortholog_one2one 2 retrogenes
retro_ttru_581, retro_ttru_974,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_1633 88.24 53.74
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Download FASTA sequences of all ENSGGOG00000009939 retrocopies