Parental gene:

GOT2, ENSGGOG00000005767

Aliases:None
Description:Aspartate aminotransferase [Source:UniProtKB/TrEMBL;Acc:G3QSK6]
Organism:Gorilla (Gorilla gorilla)
Coordinates:16:48675162..48702422(-)


>ENSGGOG00000005767
ATGGCCCTGCTGCACTCCGGCCGCGTCCTCCCCGGGATCGCCGCCGCCTTCCACCCGGGCCTCGCCGCCGCGGCCTCTGC
CAGAGCCAGCTCCTGGTGGACCCATGTGGAAATGGGACCTCCAGATCCCATTCTGGGAGTCACTGAAGCCTTTAAGAGGG
ACACCAATAGCAAAAAGATGAATCTGGGAGTTGGTGCCTACCGGGATGATAACGGAAAGCCTTACGTGCTGCCTAGCGTC
CGCAAGGCAGAGGCCCAGATTGCCGCAAAAAATTTGGACAAGGAATACCTGCCCATTGGGGGACTGGCTGAATTTTGCAA
GGCATCTGCAGAACTAGCCCTGGGTGAGAACAGCGAAGTCTTGAAGAGTGGCCGGTTTGTCACTGTGCAGACCATTTCTG
GAACTGGAGCCTTAAGGATTGGAGCCAGTTTTCTGCAAAGATTTTTTAAGTTCAGCCGAGATGTCTTTCTGCCCAAACCA
ACCTGGGGAAACCACACACCCATCTTCAGGGATGCTGGCATGCAGCTACAAGGTTATCGGTATTATGACCCCAAGACTTG
CGGTTTTGACTTCACAGGCGCTGTGGAGGATATTTCAAAAATACCAGAGCAGAGTGTTCTAATTCTGCATGCCTGCGCCC
ACAATCCCACGGGAGTGGACCCGCGTCCGGAACAGTGGAAGGAAATAGCAACAGTGGTGAAGAAAAGGAATCTCTTTGCG
TTCTTTGACATGGCCTACCAAGGCTTTGCCAGTGGTGATGGTGATAAGGATGCCTGGGCTGTGCGCCACTTCATCGAACA
GGGCATTAATGTTTGTCTCTGCCAATCATATGCCAAGAACATGGGCTTATATGGTGAGCGTGTAGGAGCCTTCACTATGG
TCTGCAAAGATGCGGATGAAGCCAAAAGGGTAGAGTCACAGTTGAAGATCTTGATCCGTCCCATGTATTCCAACCCTCCC
CTCAATGGGGCCCGGATTGCTGCTGCCATTCTGAACACCCCAGATTTGCGAAAACAATGGCTGCAAGAAGTGAAAGGCAT
GGCCGACCGCATCATTGGCATGCGGACTCAACTGGTCTCCAACCTCAAGAAGGAGGGTTCCGCCCACAACTGGCAACACA
TCACCGACCAAATTGGCATGTTCTGTTTCACAGGGCTAAAGCCTGAACAGGTGGAGCGGCTGATCAAGGAGTTCTCCATT
TACATGACAAAAGACGGCCGCATCTCTGTGGCAGGAGTCACCTCCAGCAACGTGGGCTACCTTGCCCATGCCATTCACCA
GGTCACCAAGTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 135 .85 RPM
SRP007412_cerebellum 78 .64 RPM
SRP007412_heart 210 .01 RPM
SRP007412_kidney 123 .16 RPM
SRP007412_liver 271 .77 RPM
SRP007412_testis 78 .94 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017346 possible_ortholog 3 retrogenes
retro_amel_1805, retro_amel_815, retro_amel_846,
Canis familiaris ENSCAFG00000008357 possible_ortholog 2 retrogenes
retro_cfam_586, retro_cfam_816,
Callithrix jacchus ENSCJAG00000011234 ortholog_one2one 1 retrogene
retro_cjac_2916,
Equus caballus ENSECAG00000016504 possible_ortholog 1 retrogene
retro_ecab_694,
Felis catus ENSFCAG00000025552 possible_ortholog 3 retrogenes
retro_fcat_1068, retro_fcat_1888, retro_fcat_381,
Homo sapiens ENSG00000125166 ortholog_one2one 4 retrogenes
retro_hsap_4687, retro_hsap_473, retro_hsap_960, retro_hsap_971,
Macropus eugenii ENSMEUG00000012574 possible_ortholog 1 retrogene
retro_meug_2109,
Microcebus murinus ENSMICG00000008954 ortholog_one2many 1 retrogene
retro_mmur_480,
Macaca mulatta ENSMMUG00000006000 ortholog_one2one 1 retrogene
retro_mmul_1337,
Mustela putorius furo ENSMPUG00000004862 possible_ortholog 1 retrogene
retro_mputfur_567,
Mus musculus ENSMUSG00000031672 possible_ortholog 1 retrogene
retro_mmus_2701,
Oryctolagus cuniculus ENSOCUG00000003871 possible_ortholog 1 retrogene
retro_ocun_1516,
Otolemur garnettii ENSOGAG00000000551 possible_ortholog 2 retrogenes
retro_ogar_2182, retro_ogar_827,
Pongo abelii ENSPPYG00000007413 ortholog_one2one 3 retrogenes
retro_pabe_3640, retro_pabe_823, retro_pabe_901,
Pan troglodytes ENSPTRG00000008185 ortholog_one2one 4 retrogenes
retro_ptro_3115, retro_ptro_354, retro_ptro_665, retro_ptro_670,
Rattus norvegicus ENSRNOG00000011782 possible_ortholog 1 retrogene
retro_rnor_2695,
Tupaia belangeri ENSTBEG00000001808 possible_ortholog 1 retrogene
retro_tbel_3799,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_449 86.19 84.19
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2. retro_ggor_774 80.77 71.63
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3. retro_ggor_2912 74.06 55.12
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Download FASTA sequences of all ENSGGOG00000005767 retrocopies