Parental gene:

AC007390.5, ENSG00000218739

Aliases:None
Description:None
Organism:Human (Homo sapiens)
Coordinates:2:37423630..37443336(+)


>ENSG00000218739
ATGGCCCGTACTTTGGAACCACTAGCAAAGAAGATCTTTAAAGGAGTTTTGGTAGCCGAACTTGTAGGCGTTTTTGGAGC
ATATTTTTTGTTTAGCAAGATGCACACAAGCCAAGATTTCAGGCAAACAATGAGCAAGAAATATCCCTTCATCTTGGAAG
TTTATTACAAATCCACTGAGAAGTCTGGAATGTATGGAATCAGAGAGCTAGATCAAAAAACATGGTTGAACAGCAAAAAT
TAG

Library Parental gene expression (RPM)
bodymap2_adipose 35 .80 RPM
bodymap2_adrenal 49 .97 RPM
bodymap2_brain 70 .51 RPM
bodymap2_breast 63 .09 RPM
bodymap2_colon 67 .29 RPM
bodymap2_heart 70 .21 RPM
bodymap2_kidney 49 .92 RPM
bodymap2_liver 25 .88 RPM
bodymap2_lung 38 .15 RPM
bodymap2_lymph_node 44 .15 RPM
bodymap2_ovary 68 .39 RPM
bodymap2_prostate 66 .16 RPM
bodymap2_skeletal_muscle 45 .71 RPM
bodymap2_testis 60 .52 RPM
bodymap2_thyroid 59 .62 RPM
bodymap2_white_blood_cells 39 .20 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017579 ortholog_one2one 1 retrogene
retro_amel_629,
Choloepus hoffmanni ENSCHOG00000013008 ortholog_one2many 2 retrogenes
retro_chof_328, retro_chof_49,
Felis catus ENSFCAG00000023228 ortholog_one2one 2 retrogenes
retro_fcat_1289, retro_fcat_1750,
Gorilla gorilla ENSGGOG00000025368 ortholog_one2one 2 retrogenes
retro_ggor_1755, retro_ggor_2869,
Mus musculus ENSMUSG00000062691 ortholog_one2one 2 retrogenes
retro_mmus_426, retro_mmus_509,
Pongo abelii ENSPPYG00000029876 ortholog_one2one 2 retrogenes
retro_pabe_2045, retro_pabe_3499,
Pan troglodytes ENSPTRG00000033858 ortholog_one2one 2 retrogenes
retro_ptro_1687, retro_ptro_2911,
Rattus norvegicus ENSRNOG00000040303 ortholog_one2one 2 retrogenes
retro_rnor_1144, retro_rnor_973,
Sus scrofa ENSSSCG00000020689 ortholog_one2one 2 retrogenes
retro_sscr_328, retro_sscr_434,
Tursiops truncatus ENSTTRG00000006884 ortholog_one2one 7 retrogenes
retro_ttru_1069, retro_ttru_1866, retro_ttru_1946, retro_ttru_274, retro_ttru_526, retro_ttru_57, retro_ttru_832,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2312 64.18 82.50
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2. retro_hsap_4294 66.25 98.75
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Download FASTA sequences of all ENSG00000218739 retrocopies