Parental gene: | NACA, ENSG00000196531 |
| Aliases: | NACA, NACA1, skNAC |
| Description: | nascent polypeptide-associated complex alpha subunit [Source:HGNC Symbol;Acc:7629] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 12:57106211..57125412(-) |
>ENSG00000196531
ATGCCCGGCGAAGCCACAGAAACCGTCCCTGCTACAGAGCAGGAGTTGCCGCAGCCCCAGGCTGAGACAGCTGTGCTACC
TATGTCTTCAGCCTTGAGTGTCACTGCTGCCTTAGGGCAGCCTGGACCTACCCTCCCCCCTCCTTGCTCTCCTGCCCCAC
AACAGTGCCCTCTCTCAGCTGCTAACCAGGCTTCCCCATTCCCTTCCCCCTCTACTATTGCCTCGACCCCTTTAGAAGTT
CCTTTTCCCCAGTCATCCTCTGGAACAGCCCTACCTTTGGGAACTGCCCCTGAAGCCCCAACCTTCCTACCAAACCTAAT
AGGGCCTCCCATCTCCCCAGCTGCCTTAGCTCTAGCCTCTCCCATGATAGCTCCAACTCTGAAAGGGACCCCTTCCTCTT
CAGCTCCCTTAGCTCTGGTTGCCCTGGCTCCCCACTCAGTTCAGAAGAGTTCTGCTTTTCCACCTAACCTTCTTACTTCA
CCTCCTTCAGTGGCTGTAGCTGAGTCAGGGTCAGTGATAACTCTGTCAGCTCCCATTGCTCCCTCAGAACCAAAGACTAA
TCTTAATAAAGTTCCCTCTGAGGTAGTCCCTAATCCAAAAGGCACCCCCAGCCCTCCATGTATAGTCAGTACTGTTCCTT
ACCACTGTGTGACTCCCATGGCCTCTATTCAATCTGGAGTGGCCTCCCTTCCTCAGACAACACCCACAACTACCCTAGCC
ATCGCTTCCCCTCAAGTCAAAGATACCACCATTTCCTCAGTTCTGATTTCTCCACAAAACCCAGGAAGCCTCAGCCTGAA
GGGGCCTGTTAGTCCACCTGCTGCCTTATCTCTTTCAACTCAGTCTCTTCCTGTGGTGACCTCTTCTCAAAAGACTGCGG
GTCCCAACACCCCCCCAGATTTTCCCATTTCTCTGGGCTCTCATCTTGCACCTTTACATCAGAGTTCTTTTGGTTCTGTC
CAACTTTTAGGTCAAACAGGTCCTAGTGCTTTGTCAGACCCTACAGTGAAGACCATTTCTGTAGATCATTCTTCCACAGG
GGCCTCTTATCCTTCTCAGAGATCTGTAATTCCTCCCCTTCCTTCCAGAAATGAGGTAGTTCCTGCTACTGTGGCTGCCT
TTCCAGTGGTGGCTCCATCTGTTGACAAAGGTCCCTCTACCATCTCTAGCATAACCTGCAGCCCTTCTGGCTCCTTAAAT
GTAGCTACCTCTTTTTCATTATCTCCTACAACCTCTCTCATTCTCAAAAGCTCTCCTAATGCCACTTATCATTATCCTTT
AGTGGCCCAAATGCCCGTTTCTTCTGTTGGAACCACCCCACTTGTGGTGACTAACCCCTGTACAATTGCTGCAGCACCTA
CTACTACCTTTGAGGTAGCTACTTGTGTTTCTCCTCCAATGTCATCAGGTCCCATAAGTAACATAGAACCAACTTCCCCT
GCTGCCTTGGTTATGGCACCTGTGGCTCCCAAAGAGCCTTCTACTCAAGTAGCAACCACTCTGAGGATACCAGTCTCTCC
TCCTCTGCCAGACCCTGAAGACCTCAAAAATCTCCCCAGTTCAGTATTGGTTAAATTTCCAACACAAAAAGACCTCCAAA
CTGTACCTGCCTCTCTTGAAGGAGCCCCTTTCTCTCCAGCCCAAGCAGGACTCACCACCAAGAAAGACCCTACTGTATTA
CCGTTAGTCCAGGCAGCCCCTAAAAATTCCCCTTCTTTCCAAAGTACATCCTCTTCTCCAGAGATACCTCTTTCTCCTGA
AGCCACCCTAGCAAAGAAAAGCCTTGGGGAGCCTCTCCCTATAGTGGCTGCATTTCCTTTGGAAAGTGCTGACCCTGCCG
GGGTGGCTCCCACAACTGCCAAAGCAGCTGCCTTTGAGAAGGTCCTTCCTAAACCTGAATCAGCATCTGTCTCTGCAGCA
CCCTCCCCACCAGTCTCTCTGCCTCTTGCTCCCTCCCCAGTTCCCACTCTGCCTCCTAAACAGCAATTTCTGCCGTCCTC
TCCTGGGCTGGTGTTGGAATCACCCTCTAAACCCCTTGCCCCTGCTGATGAGGATGAGCTGCTGCCTCTGATTCCCCCGG
AACCAATCTCTGGGGGAGTGCCTTTCCAGTCGGTCCTCGTCAACATGCCCACCCCTAAATCTGCTGGAATCCCTGTCCCA
ACCCCCTCTGCCAAGCAACCTGTTACGAAGAACAACAAGGGGTCTGGAACAGAATCTGACAGTGATGAATCAGTACCAGA
GCTTGAAGAACAGGATTCCACCCAGGCAACCACACAACAAGCCCAGCTGGCGGCAGCAGCTGAAATTGATGAAGAACCAG
TCAGTAAAGCAAAACAGAGTCGGAGTGAAAAGAAGGCACGGAAGGCTATGTCCAAACTGGGTCTTCGGCAGGTTACAGGA
GTTACTAGAGTCACTATCCGGAAATCTAAGAATATCCTCTTTGTCATCACAAAACCAGATGTCTACAAGAGCCCTGCTTC
AGATACTTACATAGTTTTTGGGGAAGCCAAGATCGAAGATTTATCCCAGCAAGCACAACTAGCAGCTGCTGAGAAATTCA
AAGTTCAAGGTGAAGCTGTCTCAAACATTCAAGAAAACACACAGACTCCAACTGTACAAGAGGAGAGTGAAGAGGAAGAG
GTCGATGAAACAGGTGTAGAAGTTAAGGACATTGAATTGGTCATGTCACAAGCAAATGTGTCGAGAGCAAAGGCAGTCCG
AGCCCTGAAGAACAACAGTAATGATATTGTAAATGCGATTATGGAATTAACAATGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_adipose | 638 .30 RPM |
| bodymap2_adrenal | 666 .69 RPM |
| bodymap2_brain | 300 .74 RPM |
| bodymap2_breast | 528 .53 RPM |
| bodymap2_colon | 793 .43 RPM |
| bodymap2_heart | 584 .27 RPM |
| bodymap2_kidney | 312 .09 RPM |
| bodymap2_liver | 215 .55 RPM |
| bodymap2_lung | 519 .39 RPM |
| bodymap2_lymph_node | 580 .94 RPM |
| bodymap2_ovary | 1123 .78 RPM |
| bodymap2_prostate | 761 .06 RPM |
| bodymap2_skeletal_muscle | 2154 .57 RPM |
| bodymap2_testis | 575 .23 RPM |
| bodymap2_thyroid | 445 .42 RPM |
| bodymap2_white_blood_cells | 713 .96 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000004175 | possible_ortholog | 3 retrogenes | |
| Canis familiaris | ENSCAFG00000000141 | possible_ortholog | 8 retrogenes | |
| Callithrix jacchus | ENSCJAG00000010701 | possible_ortholog | 8 retrogenes | |
| Dipodomys ordii | ENSDORG00000014522 | possible_ortholog | 2 retrogenes | |
| Equus caballus | ENSECAG00000015242 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000004598 | possible_ortholog | 6 retrogenes | |
| Microcebus murinus | ENSMICG00000016465 | possible_ortholog | 5 retrogenes | |
| Myotis lucifugus | ENSMLUG00000001169 | possible_ortholog | 16 retrogenes | |
| Macaca mulatta | ENSMMUG00000003073 | ortholog_one2one | 4 retrogenes | |
| Mus musculus | ENSMUSG00000061315 | possible_ortholog | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000001781 | possible_ortholog | 3 retrogenes | |
| Procavia capensis | ENSPCAG00000007067 | possible_ortholog | 5 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000002175 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000002150 | ortholog_one2one | 2 retrogenes | |
| Vicugna pacos | ENSVPAG00000004028 | possible_ortholog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_77 | 90.23 | 100.00 | Please wait, loading  |
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| 2. | retro_hsap_737 | 84.83 | 98.14 | Please wait, loading |
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| 3. | retro_hsap_3006 | 90.70 | 100.00 | Please wait, loading |
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| 4. | retro_hsap_3027 | 77.27 | 100.00 | Please wait, loading |
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| 5. | retro_hsap_3968 | 65.03 | 83.72 | Please wait, loading |
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| 6. | retro_hsap_3992 | 89.35 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSG00000196531 retrocopies