Parental gene:

SPIC, ENSG00000166211

Aliases:SPIC, SPI-C
Description:Spi-C transcription factor (Spi-1/PU.1 related) [Source:HGNC Symbol;Acc:29549]
Organism:Human (Homo sapiens)
Coordinates:12:101869198..101880775(+)


>ENSG00000166211
ATGACGTGTGTTGAACAAGACAAGCTGGGTCAAGCATTTGAAGATGCTTTTGAGGTTCTGAGGCAACATTCAACTGGAGA
TCTTCAGTACTCGCCAGATTACAGAAATTACCTGGCTTTAATCAACCATCGTCCTCATGTCAAAGGAAATTCCAGCTGCT
ATGGAGTGTTGCCTACAGAGGAGCCTGTCTATAATTGGAGAACGGTAATTAACAGTGCTGCGGACTTCTATTTTGAAGGA
AATATTCATCAATCTCTGCAGAACATAACTGAAAACCAGCTGGTACAACCCACTCTTCTCCAGCAAAAGGGGGGAAAAGG
CAGGAAGAAGCTCCGACTGTTTGAATACCTTCACGAATCCCTGTATAATCCGGAGATGGCATCTTGTATTCAGTGGGTAG
ATAAAACCAAAGGCATCTTTCAGTTTGTATCAAAAAACAAAGAAAAACTTGCCGAGCTTTGGGGGAAAAGAAAAGGCAAC
AGGAAGACCATGACTTACCAGAAAATGGCCAGGGCACTCAGAAATTACGGAAGAAGTGGGGAAATTACCAAAATCCGGAG
GAAGCTGACTTACCAGTTCAGTGAGGCCATTCTCCAAAGACTCTCTCCATCCTATTTCCTGGGGAAAGAGATCTTCTATT
CACAGTGTGTTCAACCTGATCAAGAATATCTCAGTTTAAATAACTGGAATGCAAATTATAATTATACATATGCCAATTAC
CATGAGCTAAATCACCATGATTGCTAA

Library Parental gene expression (RPM)
bodymap2_adipose 0 .00 RPM
bodymap2_adrenal 7 .08 RPM
bodymap2_brain 0 .00 RPM
bodymap2_breast 0 .00 RPM
bodymap2_colon 0 .00 RPM
bodymap2_heart 0 .00 RPM
bodymap2_kidney 0 .00 RPM
bodymap2_liver 0 .85 RPM
bodymap2_lung 0 .00 RPM
bodymap2_lymph_node 1 .63 RPM
bodymap2_ovary 0 .00 RPM
bodymap2_prostate 0 .00 RPM
bodymap2_skeletal_muscle 0 .00 RPM
bodymap2_testis 0 .06 RPM
bodymap2_thyroid 0 .06 RPM
bodymap2_white_blood_cells 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000009904 ortholog_one2one 2 retrogenes
retro_btau_1281, retro_btau_1837,
Callithrix jacchus ENSCJAG00000001906 ortholog_one2one 1 retrogene
retro_cjac_3835,
Dasypus novemcinctus ENSDNOG00000004496 ortholog_one2one 1 retrogene
retro_dnov_759,
Equus caballus ENSECAG00000009614 ortholog_one2many 1 retrogene
retro_ecab_542,
Echinops telfairi ENSETEG00000004217 ortholog_one2one 6 retrogenes
retro_etel_1675, retro_etel_2007, retro_etel_2008, retro_etel_593, retro_etel_929, retro_etel_933,
Gorilla gorilla ENSGGOG00000024597 ortholog_one2one 4 retrogenes
retro_ggor_1324, retro_ggor_1362, retro_ggor_2255, retro_ggor_703,
Loxodonta africana ENSLAFG00000015661 ortholog_one2one 1 retrogene
retro_lafr_912,
Myotis lucifugus ENSMLUG00000011052 ortholog_one2one 1 retrogene
retro_mluc_2169,
Macaca mulatta ENSMMUG00000020873 possible_ortholog 1 retrogene
retro_mmul_1245,
Oryctolagus cuniculus ENSOCUG00000008070 ortholog_one2many 1 retrogene
retro_ocun_161,
Otolemur garnettii ENSOGAG00000015148 ortholog_one2one 1 retrogene
retro_ogar_1782,
Pongo abelii ENSPPYG00000004873 ortholog_one2one 4 retrogenes
retro_pabe_1444, retro_pabe_1445, retro_pabe_2819, retro_pabe_686,
Pan troglodytes ENSPTRG00000005351 ortholog_one2one 4 retrogenes
retro_ptro_1206, retro_ptro_1218, retro_ptro_3070, retro_ptro_598,
Rattus norvegicus ENSRNOG00000005720 ortholog_one2one 1 retrogene
retro_rnor_1519,
Ictidomys tridecemlineatus ENSSTOG00000015457 ortholog_one2many 3 retrogenes
retro_itri_1785, retro_itri_235, retro_itri_29,
Tursiops truncatus ENSTTRG00000017205 ortholog_one2one 1 retrogene
retro_ttru_1708,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_864 92.00 100.00
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2. retro_hsap_1748 89.16 100.00
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3. retro_hsap_1800 68.12 64.11
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4. retro_hsap_3135 68.65 99.60
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Download FASTA sequences of all ENSG00000166211 retrocopies