Parental gene:

ENSFCAG00000028951

Aliases:None
Description:None
Organism:Cat (Felis catus)
Coordinates:E1:45254522..45275428(-)


>ENSFCAG00000028951
ATGGAGCCGCTGTACCAGCAAACGCACAAGCAGGTCCACGAGATCCAGTCTCACATGGGACGCCTGGAGACCGCGGACAA
GCAGTCTCTGCACTTAGTAGAAAACGAAATCCAAGCAAGCATTGACCAGATATTCAGCCATCTAGAACGTCTGGAGATTC
TGTCCAGCAAGGAGCCCCCGAACAAAAGACAGAATGCCAAACTTCGTGTTGACCAGTTAAAGTATGATGTCCAGCACCTG
CAGACTGCTCTCAGAAACTTCCAGCATCGGCGATACGCAAGGGAGCAGCAGGAGAGACAGCGAGAGGAACTTCTGTCTCG
AACCTTCACCGCTAACGACTCTGACACGACCATCCCAATGGATAGCTCGCTGCATTTCAACTCCTCCCTCCAGAAAATTC
ACCATGGCATGGATGACCTCATCGGAGGCGGGCACAGTATTCTGGACGGACTGAGGGCCCAGAGACTGACCTTGAAGGGG
ACTCAGAAGAAGATCCTTGACATTGCCAACATGCTGGGCTTGTCCAACACCGTGATGCGGCTCACTGAGAAGCGGGCTTT
CCAGGACAAGTACTTCATGATCGGTGGCATGCTTCTCACCTGTGTGGTCATGTTCCTCGTGGTGCAGTACCTGACATGA

Library Parental gene expression (RPM)
SRP017611_brain 60 .71 RPM
SRP017611_kidney 59 .36 RPM
SRP017611_liver 44 .78 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000013419 ortholog_one2one 1 retrogene
retro_cfam_1351,
Callithrix jacchus ENSCJAG00000020030 ortholog_one2one 1 retrogene
retro_cjac_3180,
Myotis lucifugus ENSMLUG00000002709 possible_ortholog 1 retrogene
retro_mluc_752,
Macaca mulatta ENSMMUG00000018689 ortholog_one2one 1 retrogene
retro_mmul_367,
Nomascus leucogenys ENSNLEG00000004922 ortholog_one2one 1 retrogene
retro_nleu_1211,
Pongo abelii ENSPPYG00000008290 ortholog_one2one 1 retrogene
retro_pabe_1596,
Pan troglodytes ENSPTRG00000009323 ortholog_one2many 1 retrogene
retro_ptro_1290,
Ictidomys tridecemlineatus ENSSTOG00000016069 ortholog_one2one 2 retrogenes
retro_itri_1790, retro_itri_270,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_678 68.55 73.11
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Download FASTA sequences of all ENSFCAG00000028951 retrocopies