Parental gene:

ENSCJAG00000020030

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:5:79437935..79457300(-)


>ENSCJAG00000020030
ATGGATACCCTGTACCAGCAAACGCACAAGCAGGTCCATGAGATCCAGTCTCGCATGGGACGCCTGGAGACGGCAGACAA
GCAGTCTGTGCACTTAGTAGAAAACGAAATCCAAGCAAGCATAGACCAGATATTCAGCCATCTAGAACGCCTGGAGATTT
TATCCAGCAAGGAGCCCCCTAACAAAAGGCAGAATGCCAAACTTCGGGTTGACCAGTTAAAGTATGATGTCCAGCACCTG
CAGACTGCTCTCAGAAACTTCCAGCATCGGCGCCATGCAAGGGAACAGCAGGAGAGGCAGCGAGAAGAGCTTCTGTCTCG
AACCTTCACCACTAACGACTCTGACACCACCATACCAATGGACGAATCACTGCAGTTTAACTCCTCCCTCCAGAAAATTC
ACCACGGCGTGGATGACCTCATTTTAGATGGGCACAATATTTTAGATGGACTGAGGAACCAGAGACTGACCTTGAAGGGC
ACTCAGAAGAAGATCCTCGACATTGCCAACATGCTGGGCTTGTCCAACACAGTGATGCGGCTCATCGAGAAGCGGGCTTT
CCAGGACAAGTACTTCATGATCGAGACGGGGTTTTGCTGTCTTGGCCAGATTGGTCTTGAACTCTTGGCCCCAAGAGATC
CGCCCCCTTCGGCCTCCCAAAGTGCTGGGGTTACAGGCGTGAACCAC

Library Parental gene expression (RPM)
SRP051959_colon 7 .08 RPM
SRP051959_heart 8 .26 RPM
SRP051959_kidney 9 .98 RPM
SRP051959_liver 9 .47 RPM
SRP051959_lung 9 .16 RPM
SRP051959_lymph_node 10 .14 RPM
SRP051959_skeletal_muscle 6 .05 RPM
SRP051959_spleen 8 .70 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000013419 ortholog_one2one 1 retrogene
retro_cfam_1351,
Felis catus ENSFCAG00000028951 ortholog_one2one 1 retrogene
retro_fcat_678,
Myotis lucifugus ENSMLUG00000002709 possible_ortholog 1 retrogene
retro_mluc_752,
Macaca mulatta ENSMMUG00000018689 ortholog_one2one 1 retrogene
retro_mmul_367,
Nomascus leucogenys ENSNLEG00000004922 ortholog_one2one 1 retrogene
retro_nleu_1211,
Pan troglodytes ENSPTRG00000009323 ortholog_one2one 1 retrogene
retro_ptro_1290,
Ictidomys tridecemlineatus ENSSTOG00000016069 ortholog_one2one 2 retrogenes
retro_itri_1790, retro_itri_270,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_3180 79.50 91.55
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Download FASTA sequences of all ENSCJAG00000020030 retrocopies