Parental gene:

PDAP1, ENSFCAG00000015067

Aliases:None
Description:PDGFA associated protein 1 [Source:HGNC Symbol;Acc:14634]
Organism:Cat (Felis catus)
Coordinates:E3:6298135..6309161(-)


>ENSFCAG00000015067
ATGCCTAAAGGAGGGAGAAAGGGAGGCCACAAAGGCCGGGCACGGCAGTACACAAGCCCTGAGGAGATCGACGCGCAGCT
CCAGGCTGAGAAGCAGAAGGCCAGGGAAGAAGAGGAACAAGGAGAAGAAGGTGGAGATGGGGCTGCAGGGGACCCCAAAA
AGGAGAAGAAATCCCTAGACTCAGATGAGAGTGAAGATGAAGAAGATGATTACCAGCAAAAGCGCAAAGGCGTGGAAGGG
CTCATCGACATTGAGAACCCTAACAGGGTGGCACAGACAACCAAAAAGGTCACACAACTGGACCTGGATGGGCCCAAGGA
GCTTTCAAGGAGAGAACGAGAAGAAATCGAGAAGCAGAAAGCAAAAGAGCGTTACATGAAAATGCATTTAGCTGGGAAGA
CAGAGCAAGCCAAAGCTGACCTTGCCCGGCTGGCAATCATTCGGAAACAGCGGGAAGAGGCTGCCCGGAAGAAAGAAGAG
GAGAGGAAAGCAAAAGACGACGCGACCTTGTCGGGAAAGCGAGTGCAGTCGCTGTCCCTGAATAAGTAG

Library Parental gene expression (RPM)
SRP017611_brain 36 .38 RPM
SRP017611_kidney 36 .48 RPM
SRP017611_liver 16 .58 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000015838 ortholog_one2one 2 retrogenes
retro_cjac_2676, retro_cjac_2725,
Equus caballus ENSECAG00000024426 ortholog_one2one 1 retrogene
retro_ecab_449,
Echinops telfairi ENSETEG00000009926 ortholog_one2one 1 retrogene
retro_etel_900,
Homo sapiens ENSG00000106244 ortholog_one2one 3 retrogenes
retro_hsap_1061, retro_hsap_3210, retro_hsap_3506,
Gorilla gorilla ENSGGOG00000025196 ortholog_one2one 5 retrogenes
retro_ggor_1776, retro_ggor_1778, retro_ggor_2179, retro_ggor_2371, retro_ggor_837,
Macaca mulatta ENSMMUG00000001460 ortholog_one2one 2 retrogenes
retro_mmul_1865, retro_mmul_943,
Mus musculus ENSMUSG00000029623 ortholog_one2one 1 retrogene
retro_mmus_2581,
Nomascus leucogenys ENSNLEG00000011017 ortholog_one2one 1 retrogene
retro_nleu_1158,
Otolemur garnettii ENSOGAG00000010874 ortholog_one2many 2 retrogenes
retro_ogar_2199, retro_ogar_789,
Ochotona princeps ENSOPRG00000013615 ortholog_one2one 2 retrogenes
retro_opri_262, retro_opri_512,
Pongo abelii ENSPPYG00000017375 ortholog_one2one 4 retrogenes
retro_pabe_2659, retro_pabe_2806, retro_pabe_2901, retro_pabe_884,
Pan troglodytes ENSPTRG00000041711 ortholog_one2one 4 retrogenes
retro_ptro_1711, retro_ptro_2240, retro_ptro_2378, retro_ptro_722,
Ictidomys tridecemlineatus ENSSTOG00000001679 ortholog_one2one 1 retrogene
retro_itri_765,
Tupaia belangeri ENSTBEG00000010152 ortholog_one2one 5 retrogenes
retro_tbel_1365, retro_tbel_3543, retro_tbel_4066, retro_tbel_766, retro_tbel_975,
Tursiops truncatus ENSTTRG00000003004 ortholog_one2one 1 retrogene
retro_ttru_1343,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1227 55.43 96.15
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSFCAG00000015067 retrocopies